Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02482 ATGAGAAAGAACTCAATTGTGTTCCTTGTGGCTTTGGCTTTGTTGTTCCTTATTGTACTTCCACAGTTGTGCTTGTGTGAGAATTCAACCTCTGGCCATTCAACGGAAGAGCGACAAGCTCTTCAAAGACTCAAAAGAAGTTTCTCTAACAGCTCCATGTTTGTTTCTTGGGAAGGAAATGATCAATGCCAGTGGAAAGGAGTGCAATGTGATGGCATCACCGGACACGTTGTCAAGCTTGTTCTCCATTGGCAAAAGTCATGCAGTTGTCGACACGGCTTTATATGCACTTGCTCATCACAAAATTCTAATGGCGTTCACCCTTCTATATTGGAGTTGAAACACTTGAACTATCTCGAACTCACAGGAATCTCTTTTGGCAATGGTCCTATTCCAGCATTCCTTGCTTCCATGAATCAACTGACACATCTTAACCTCTCTCACTGTGATTTCATGGGAAAGGTTCCTCGTCAATTTGGTAATCTTTCAAACTTGCAGGTTCTTGATTTCAGTGGAAATCCCTTAGATGTTGATGATCTGGCTTGGCTTTCTAAACTTTCATCACTGAAACACCTAGCAATGAATGGAGTGAACCTTGGGGACGCATATAATCTATTCCAGGTGCTTGATACCCTTCCTTTCTTGTTGCATGTAGAGTTTAGTGGATGTGATCTTACCAACATGAACTTTCCTGCTGGCCATGTTAATTCTACGTTTCTTGCCAAAGTTCAAGTTCTGAATCTTGCTCAAAATTTACTTTCTAGCCCTGTTCCTGATGCTTTTCTGAACATGAGTTCAATTCTAGACCTCAACCTTGGTTACAACAATATCACTTTACTTCCAAATTGGTTGGTTAATCTTGATGCCCTTGTCAATCTTAATCTTTCTGGTAATCCCTTCAAGAGGATTGAAGCCTCCGTGATATCTATCTTGACAAACATGTGCTCTCTCCGATCATTAGACTTGTCATCTAGCATGCCTATTTTTGAATGGTCGGGACTTGGTCAGGGAAACTATTCGGGATGTGGGAGATACGATTTGGAAGTTTTAGTGTTGAGAGGAAGTGGAATTAAGGACAGTTTGCCTAGTTGGTTTGGACAACTGTCAAACTTGAATATCCTTGATCTTGCAATGAACTTATTCCATGGTCCAATTCCATCATCCTTTGGAAATTTGTTGGCCTTGACGACATTAGATCTTTCTGATAATCAACTACATGGGTCAATTCCAGCTACCTTTGGACAATTGTCATCTTTAGGCTTATTAGATCTTTCTAATAATCACTTGAATGGAAGCATTCCTGAAAGCCTTGGACAACTGAGCAATCTAGTGACCTTAAGGATGGTTAACAACTCATTCACAGGTATCATATCAGAGATTCACCTTCGTAACCTCTCAAATTTGATAGAATTTCAAATAGGATACAACAATCTTGATGTGAAGACAGAGTCCAATTGGAAACCACCTTTCAAGTATTTACAAGTCCTTGGAATGGCCTACAATAATGTCACACATTTTCCTCAGTGGGTTCAAACACAGGAGCAACTTTTTACATTAGACATCTCCAACAATAAGACTAGAGGAAATATTCCACAAGATTTTGGTCATCATCTTCCAAACTTGTATAGGCTAAATCTCCGTACTAACCTTATAGAAGGTGCAATACCAGACTCATTGTGCAAGATGGAAAGCTTGTTCATTCTCGATCTCTCAGAAAACAGATTTTCAGGCACAATTCCTAATTGTTGGGGAAGGCAGTTTTTCTCAGTCTTAAATATGGCATCAAATCGGTTATCGGGCACAATTCCAAACTCATTTGGGAATCTTACAGTGGGATGGTTGAATTTGAGCAACAATAGTCTCCACGGAGAGCCTTTTCAAGCCTTGCAAAGCAACGAATGGTTGCAGATTTTGGATCTTGGTGAGAATCAATTTACAGGAAAAATACCTTCTTGGTGGGCAGCAAAAACTGTTCTTGAAAATCTGAGACTACGGGAAAACTTGTTCAGTGGTGATATTCCGACATCTCTCTGCCAGTTCTTCAATTTAAAAATCCTGGACCTTGCTGACAATAATTTGTCAGGTTCAATCCCTCCTTGCATTGGTGATTTCCGGGGCATGATGATAAAAGGAGTTGAAGCACCACCAGCATTCACTTATGATGCAGATGAATGGGCAAAAAGGCATTTCAAGCAATTCCTGAAAGGAAATGAGTATGATTACACAAAAAAATTCGCATATCCATACTTGGTAAACTTAGACTTGTCGAGTAACAGTCTGGTGGGATCAATCCCTGACGACTTAACCTCTCTTTCAGGATTGATTGGCTTGAACTTATCACATAATCACTTGTCAGCAAAAATTCCAAGCAGTATACAGAAAATGAAGTCACTGGAATCTCTCGATTTCTCCAACAATAACCTTTCTGGTCCCATCCCAACCAACATGTCCATCATGGATAATCTAGGTTTCTTAAACTTGTCCTACAATAATTTATCTGGTTCCATTCCAACAAATGATCATTTCCTCACCTTTGATAATCGATCTTATGCTGGCAATCCACATCTCTGCGGAGGACCCCTTGCGAATAGATGTTCCATCAGCAATGGGGTACCTACCAGCGTGAGCCATGAAGAAAACAATGAGAACGGTGATAAGAAAGAAAAGGTGTTGTTTTACTTTGTCATTGCACTTGGCTTCATAACAGGGTTTTGGGCATTCTTGGGAACTCTGTTGTTGAAGAGGGATTGGAGACACGCTTACTTTGTTTATGTGGATGGGGTTGCAGATAAAATCTATGTAGCAATAATGGTAAGAATAGCGAAAAACTGA 2832 0.4008 MRKNSIVFLVALALLFLIVLPQLCLCENSTSGHSTEERQALQRLKRSFSNSSMFVSWEGNDQCQWKGVQCDGITGHVVKLVLHWQKSCSCRHGFICTCSSQNSNGVHPSILELKHLNYLELTGISFGNGPIPAFLASMNQLTHLNLSHCDFMGKVPRQFGNLSNLQVLDFSGNPLDVDDLAWLSKLSSLKHLAMNGVNLGDAYNLFQVLDTLPFLLHVEFSGCDLTNMNFPAGHVNSTFLAKVQVLNLAQNLLSSPVPDAFLNMSSILDLNLGYNNITLLPNWLVNLDALVNLNLSGNPFKRIEASVISILTNMCSLRSLDLSSSMPIFEWSGLGQGNYSGCGRYDLEVLVLRGSGIKDSLPSWFGQLSNLNILDLAMNLFHGPIPSSFGNLLALTTLDLSDNQLHGSIPATFGQLSSLGLLDLSNNHLNGSIPESLGQLSNLVTLRMVNNSFTGIISEIHLRNLSNLIEFQIGYNNLDVKTESNWKPPFKYLQVLGMAYNNVTHFPQWVQTQEQLFTLDISNNKTRGNIPQDFGHHLPNLYRLNLRTNLIEGAIPDSLCKMESLFILDLSENRFSGTIPNCWGRQFFSVLNMASNRLSGTIPNSFGNLTVGWLNLSNNSLHGEPFQALQSNEWLQILDLGENQFTGKIPSWWAAKTVLENLRLRENLFSGDIPTSLCQFFNLKILDLADNNLSGSIPPCIGDFRGMMIKGVEAPPAFTYDADEWAKRHFKQFLKGNEYDYTKKFAYPYLVNLDLSSNSLVGSIPDDLTSLSGLIGLNLSHNHLSAKIPSSIQKMKSLESLDFSNNNLSGPIPTNMSIMDNLGFLNLSYNNLSGSIPTNDHFLTFDNRSYAGNPHLCGGPLANRCSISNGVPTSVSHEENNENGDKKEKVLFYFVIALGFITGFWAFLGTLLLKRDWRHAYFVYVDGVADKIYVAIMVRIAKN 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02482 943 Gene3D Ribonuclease Inhibitor 460 870 IPR032675 -
Phco6g02482 943 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 362 457 - -
Phco6g02482 943 SUPERFAMILY RNI-like 555 836 - -
Phco6g02482 943 Pfam Leucine rich repeat N-terminal domain 36 71 IPR013210 -
Phco6g02482 943 SUPERFAMILY L domain-like 61 324 - -
Phco6g02482 943 PRINTS Leucine-rich repeat signature 395 408 - -
Phco6g02482 943 PRINTS Leucine-rich repeat signature 416 429 - -
Phco6g02482 943 SUPERFAMILY L domain-like 346 610 - -
Phco6g02482 943 Gene3D Ribonuclease Inhibitor 231 330 IPR032675 -
Phco6g02482 943 PANTHER LRR RECEPTOR-LIKE KINASE 346 417 - -
Phco6g02482 943 Pfam Leucine rich repeat 347 405 IPR001611 GO:0005515
Phco6g02482 943 Pfam Leucine rich repeat 242 299 IPR001611 GO:0005515
Phco6g02482 943 Pfam Leucine rich repeat 748 808 IPR001611 GO:0005515
Phco6g02482 943 Pfam Leucine rich repeat 515 575 IPR001611 GO:0005515
Phco6g02482 943 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 489 710 - -
Phco6g02482 943 Gene3D Ribonuclease Inhibitor 331 459 IPR032675 -
Phco6g02482 943 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Phco6g02482 943 Pfam Leucine Rich Repeat 682 702 IPR001611 GO:0005515
Phco6g02482 943 Gene3D Ribonuclease Inhibitor 34 230 IPR032675 -
Phco6g02482 943 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 746 865 - -
Phco6g02482 943 SMART LRR_typ_2 538 562 IPR003591 -
Phco6g02482 943 SMART LRR_typ_2 795 819 IPR003591 -
Phco6g02482 943 SMART LRR_typ_2 392 415 IPR003591 -
Phco6g02482 943 SMART LRR_typ_2 240 263 IPR003591 -
Phco6g02482 943 SMART LRR_typ_2 264 287 IPR003591 -
Phco6g02482 943 SMART LRR_typ_2 771 794 IPR003591 -
Phco6g02482 943 SMART LRR_typ_2 416 440 IPR003591 -
Phco6g02482 943 SMART LRR_typ_2 680 704 IPR003591 -
Phco6g02482 943 SMART LRR_typ_2 162 184 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02482 Phco-Chr6 46244123 46246954 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02482 6 46244123 46246954 Phco6g02482 6 46244123 46246954 ECH