Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02480 ATGGCCAACGCGGCATCTGGAATGGCTGTTCTTGATGAGTGTAAATTAAAGTTCCTGGAGCTAAAGGCAAGGAGGAACTTCCGTTTCATTGTGTTTAAGATTGAGAACTACGAAGTGGTAGTGGAGAAACTTGGAAGCCCAGAAGAAACCTATGAGGACTTCACTGCATGTCTTCCTGCTAATGAGTGCCGCTACGCTGTCTTTGATTTTGATTTCACGACAAATGAAAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGGCTCCGGATACATCAAAGGTGAGAGAGAAGATGGTGTATGCGAGCTCCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAGGTTGAGTTGCAAGCAACGGATCCCAGTGAGATGAGCTTTGATATCATAAAAGCAAGGGCAAATATATAA 417 0.4365 MANAASGMAVLDECKLKFLELKARRNFRFIVFKIENYEVVVEKLGSPEETYEDFTACLPANECRYAVFDFDFTTNENCQKSKIFFIAWAPDTSKVREKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARANI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02480 138 ProSiteProfiles ADF-H domain profile. 5 137 IPR002108 GO:0003779
Phco6g02480 138 SUPERFAMILY Actin depolymerizing proteins 2 136 - -
Phco6g02480 138 SMART adf_2 12 137 IPR002108 GO:0003779
Phco6g02480 138 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
Phco6g02480 138 FunFam Actin-depolymerizing factor 2 1 137 - -
Phco6g02480 138 Gene3D Severin 1 138 IPR029006 -
Phco6g02480 138 PANTHER COFILIN-RELATED 2 136 IPR017904 GO:0015629|GO:0030042
Phco6g02480 138 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02480 Phco-Chr6 46239020 46240641 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02480 6 46239020 46240641 Phco6g02480 6 46239020 46240641 ECH