Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02451 ATGGCAACAGTCACCAACACCGTCAATGCGGCAGCCTCGGCCATAGTAGCTGCTGAATCCAGAGTCCAGCCTGCCACCTCACCGAAAAAGCGTTGGGGAAGCTGCTGGAGCTTATGTTGGTGTTTTGGACCCCATAAAAATAGCAAGAGAATTGGCAACGCTGTCCTTGTTCCTGAACCTGTTGAACCAGTGGGTCAAAGTGGATCTCATCTTGCTACTGCAGCACCAAATCCTTCAACAGCCGTTGCAATGCCATTCATTGTCCCTCCCTCTTCACCTGCCTCTTTTCTGGAATCTGATCCTCCATCTGCCACTCAATCACCGGTTGGATTATTCTCTCTCAGTTCTCTCAATGCCAATGCTTCTTGTGGACCTGCATCCATTTTTGCTATAGGTCCTTATACCTACGAGACCCAGTTAGTCTCACCGCCTGTATTTTCTAACTTTACTACTGAACCATCTACTGCTCCTTTCACTCCACCTCCTGAATCTGTGCAGCTGACGACACCATCATCCCCTGAGGTGCCATTTGCTCAATTGTTGACATCTTCTTTAGACCGAGATTGTAAAAATAAAGGTACAAATCAGAGGTTTGCGTTATCCAATTATGAGTTTCAACTTTATCAACAATACCCCGGAAGCCCTGGCACCCAACTTATATCACCAGGATCAATAATTTCTACTTCTGGAAGTTCTACTCCTTTCCCTGATAGACACCCACTTCCTGAATTCCATAAAGGGGAAGCTTCAAAGCTCTTGGGCTTTGAACACCTCTCCACACATAAATGGAATTCGAGACTTGGATCTGGATCTTTGACACCAGACAGTACTGGGCAAGGTTCAGGACTAGGCTCAGGATCTTTGACACCTAATGCTGTTAAGCTCGTTTCACAACTAAGCTCTGGGTGTTTGACACCTGAAGGTGTAGCACCAACCGCTAGAAATGGCATCTATGTTGGAAAACGAATTTCTGAGTTAACATCCCTTGCAAATTCCGAGAACGAGTGTCAACCCAATGCAGCATTAGTCGATCACAGAGTTTCATTTGAATTGACTGGGGAGGATGTCGCAAGATGTCTTGCAAATAAATCAGGGTCTCCATTGATTGGAAACATCTCAGGGTCTTCTCAGGGTGCACTGGTTGGAGAGCCTGTTGACAGAGAAAGGATACACAAGAACTCCGATAGTGACTGTGATTTGTGTTCAAGGAAAACTTCAAATGATAAGCCTGAAAATTCTCCTGGAGAAGGAGAGGAGCAGTGCTGTCTAAAGCACAACTCTTCTAGTTCTTCCAAAGATTTTAACTTTGACAGCAGAAAAGGAGTTGTTGCTGATAATCCTGCCAATGCGTCGGAATGGTGGACTAACAAGAAAATTGTTGGAAAGGAAGGTAGCTCAAGCAACGGTTCGGCATTTTTTCCAATGTTACAGTCAGAAATCATTTAA 1446 0.4495 MATVTNTVNAAASAIVAAESRVQPATSPKKRWGSCWSLCWCFGPHKNSKRIGNAVLVPEPVEPVGQSGSHLATAAPNPSTAVAMPFIVPPSSPASFLESDPPSATQSPVGLFSLSSLNANASCGPASIFAIGPYTYETQLVSPPVFSNFTTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLTSSLDRDCKNKGTNQRFALSNYEFQLYQQYPGSPGTQLISPGSIISTSGSSTPFPDRHPLPEFHKGEASKLLGFEHLSTHKWNSRLGSGSLTPDSTGQGSGLGSGSLTPNAVKLVSQLSSGCLTPEGVAPTARNGIYVGKRISELTSLANSENECQPNAALVDHRVSFELTGEDVARCLANKSGSPLIGNISGSSQGALVGEPVDRERIHKNSDSDCDLCSRKTSNDKPENSPGEGEEQCCLKHNSSSSSKDFNFDSRKGVVADNPANASEWWTNKKIVGKEGSSSNGSAFFPMLQSEII 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02451 481 MobiDBLite consensus disorder prediction 396 435 - -
Phco6g02451 481 MobiDBLite consensus disorder prediction 152 171 - -
Phco6g02451 481 MobiDBLite consensus disorder prediction 396 415 - -
Phco6g02451 481 MobiDBLite consensus disorder prediction 266 286 - -
Phco6g02451 481 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 5 479 IPR040420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02451 Phco-Chr6 45945094 45948430 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00733 5 8064081 8068289 Phco6g02451 6 45945094 45948430 ECH
Phco6g02451 6 45945094 45948430 Phco6g02451 6 45945094 45948430 ECH
Phco5g00733 5 8064081 8068289 Phco6g02451 6 45945094 45948430 PCT