Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02445 ATGAATTCAGAATCAGAGATGAGTGGAGGTGTTTCTGGGAAGGTGAAGAAGTATTTGCAGAAGGGGATATGGTGGTTCTCATTGTTGATCTTTGTTGGGTATGTAATGGTTTGGATTGTAAGGCCTACCAACATCTTCTATCTACAATGGTTTCCAGATATTGAAGCAAAGGCAGATTCAATATACTTTGGTGAACAAGGGACAATCATACTCATATACACATTTCCAATCCTATTAATTGGCACTTTGGCGAGTCTATACCTTCATTTGGAGCAAAAACGTTCTAATCACAATACTGAAAGCAAGGGATGGAGATTCTTAGGATTGGCATCATGGAAAAGACCATTGCTTACAAAAGGTCCTCTTGGGATAATCACGATGACAGAGCTCTCTTTCGCCATCATGTTTGTTTTACTCTTGATTTGGACCTTCTGCTCCTACTTACATAGCATGTTTGCAAGCGCGGCACAAGAGGCAGTTAAGGAGAGAGACCAAGTGTGGGAAATCAAGCTGGAATATTCAGCCCTTGCTTTAGGCCTTGTTGGGAATATTTGCTTGGCTTTATTGTTCTTTCCAGTCTCAAGAGGGTCTTCAATTTTGAGGTTCATTGGCCTAACTTCGGAGGGAAGCATCAAGTATCATATATGGTTAGGACACACTGCAATGGTCCTCTTCACAGCTCATGGTCTAGGTTATATAATTTTTTGGTACAAGACACACCAAATCTTAGAGATATTCAAATGGAACAAAGTTGGAGTGTCAAATGTGGCTGGAGAAGTTTCTCTACTTGCTGGATTAATCATGTGGGCTGCTACCTTGCCTTCCATAAGGCGAAAGGCTTTTGAGCTTTTCTTCTACACTCATTACCTCTACATTGTCTTTGTAGTCTTCTATGTGCTACATTTGGGATTTTCCTCCTCTTGCGTAGTGCTTCCAGGATTTTACCTATTCATGATCGATCGATACTTGAGATTCCTACAGTCTCAGCAGAAAATTCGGTTGGTTTCTGCCCGAGTTTTGCCTTGTGAAGCTGTTGAATTAAATTTCTCCAAGAACCTAGGACTGAGCTATGCCCCTACAAGCACCATTTTTATTAATGTTCCTAGTATTTCCAAGTTGCAATGGCACCCTTTTACAATCACCTCCTGCAGTGATACTGATCCTGACACCTTAAGCGTTGTCATCAGAAGTTCAGGAACCTGGTCCAATACTTTGTACCAGAAGCTATCATCTTCGTCCCCATTATCCCACCTTGATGTCTCCATTGAAGGACCCTATGGACGTGATTCAACCTCTTACTTAAGGCATGAGTTGCTTGTGTTGATAAGTGGAGGAAGTGGCATTACTCCTTTCATTTCCATAATCCGTTCACTGGTCTTTAAGGCCAACACTGAAGGTGGAAAAACTCCAAGAGTTCTTCTTATATGTGCCTTCAAGAAGTCTATTGATCTTACCATGATAGACCTCATCCTCCCAGTTTCCGCCACCAGCACCACCTTCGATATCTCACGCTTGCAGCTCCAGATTGAAGCCTATGTAACCAGAGAGAAACAGCCAGACATGAATGACAAAAGGCTTACTCAAACATCATGGTTCAAGGGAAATCTATTAGATGAACCAGTTTCTGAAGTTTTAGGGAAAAACAGTTGGCTCTATCTTAGCATTATCATCTCATCCTCCTTTATATTATTCCTTCTACTTATTGGCATCTTAACTAGATATTACATATATCCAATTGACTATAATACAGACCTGATATACCCTGATTTCTCAAGGTCTAGTCTAAGCATGTTATTCATATGCATGTCTATCGCCATTGTAGCAACATCTGCTTTCCTATGGAACAAGAAACAGAACAAGGATTTGGGGCAGATTAAGAACATTTACACATCAGATCAATCAACTTCACCGGGTTCAGGATACTACAATGCTGACAAAGAATTAGGGAGTCTTCCCCTCCAATCCCTAGTCCAAACAGCAAAAGTACATTATGGAGAAACACCAGACATAAAAAAAATACTCTCTGGCTGTACTGGATCAAGCATTGGAGTTCTTGTTAGTGGCCCAAGAAAAATGAGACATGAGGTAGCATCAATTTGCACTTCTTGTTCCACAGATGACCTACATTTTGAGTCCGTTAGCTTCAGCTGGTGA 2154 0.4099 MNSESEMSGGVSGKVKKYLQKGIWWFSLLIFVGYVMVWIVRPTNIFYLQWFPDIEAKADSIYFGEQGTIILIYTFPILLIGTLASLYLHLEQKRSNHNTESKGWRFLGLASWKRPLLTKGPLGIITMTELSFAIMFVLLLIWTFCSYLHSMFASAAQEAVKERDQVWEIKLEYSALALGLVGNICLALLFFPVSRGSSILRFIGLTSEGSIKYHIWLGHTAMVLFTAHGLGYIIFWYKTHQILEIFKWNKVGVSNVAGEVSLLAGLIMWAATLPSIRRKAFELFFYTHYLYIVFVVFYVLHLGFSSSCVVLPGFYLFMIDRYLRFLQSQQKIRLVSARVLPCEAVELNFSKNLGLSYAPTSTIFINVPSISKLQWHPFTITSCSDTDPDTLSVVIRSSGTWSNTLYQKLSSSSPLSHLDVSIEGPYGRDSTSYLRHELLVLISGGSGITPFISIIRSLVFKANTEGGKTPRVLLICAFKKSIDLTMIDLILPVSATSTTFDISRLQLQIEAYVTREKQPDMNDKRLTQTSWFKGNLLDEPVSEVLGKNSWLYLSIIISSSFILFLLLIGILTRYYIYPIDYNTDLIYPDFSRSSLSMLFICMSIAIVATSAFLWNKKQNKDLGQIKNIYTSDQSTSPGSGYYNADKELGSLPLQSLVQTAKVHYGETPDIKKILSGCTGSSIGVLVSGPRKMRHEVASICTSCSTDDLHFESVSFSW 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02445 717 CDD NOX_Duox_like_FAD_NADP 334 515 - -
Phco6g02445 717 Gene3D - 420 545 IPR039261 -
Phco6g02445 717 SFLD Ferric Reductase Domain 61 717 - -
Phco6g02445 717 PANTHER NADPH OXIDASE 45 715 - -
Phco6g02445 717 FunFam Ferric reduction oxidase 3 425 544 - -
Phco6g02445 717 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 420 493 IPR039261 -
Phco6g02445 717 SFLD Ferric reductase subgroup (FRE) 19 717 - -
Phco6g02445 717 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 327 432 IPR017927 GO:0016491
Phco6g02445 717 Pfam FAD-binding domain 331 428 IPR013112 GO:0016491
Phco6g02445 717 SUPERFAMILY Riboflavin synthase domain-like 331 428 IPR017938 -
Phco6g02445 717 Pfam Ferric reductase like transmembrane component 178 298 IPR013130 -
Phco6g02445 717 Pfam Ferric reductase NAD binding domain 436 700 IPR013121 GO:0016491
Phco6g02445 717 PRINTS Cytochrome B-245 heavy chain signature 418 431 IPR000778 GO:0016020|GO:0016491
Phco6g02445 717 PRINTS Cytochrome B-245 heavy chain signature 441 458 IPR000778 GO:0016020|GO:0016491
Phco6g02445 717 PRINTS Cytochrome B-245 heavy chain signature 232 252 IPR000778 GO:0016020|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02445 Phco-Chr6 45857213 45861034 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02445 6 45857213 45861034 Phco6g02445 6 45857213 45861034 ECH