Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02444 ATGAGGAGCCTTACATTCCTTAAGATAATTTTTGTTTTGGTGTTTGTTGGGTGGATCATGGTTTGGATTTTGTTGCCCACAAAGGTTTACAAGAACACCTGGAACCCCCAACTCGAAAACAAATTAAACTCTACTTACTTTAGAGAACAAGGGACAAATCTGTTGCTTTTCACTTTCCCCGTCGTCTTCATGGGGGCTCTGGGTTCTATCTATCTCCATCTTCACCTGCAAAAACCTGAAAACCTATCTTCCAAAAGCGGAGGAACTGCAAACAGAAGGTTAAGTTTCTTGAGACGGCCATTTGTTGTGATGTCTCCAATAGGAATTCTGACATCTATGGAGCTTATTTTTGCACTCATGTTTGCTGCACTCTTGATATGGTCCCTTTCCAATTACTTACACATTAGTTTTGGCCACCTTCATATGCACATGGAGGGTGAAAAAGTGTGGCAAGCAAAGTTGAGGAGTGTGTCTCTGAGAGCTGGGTACATAGGAAACATATGTTGGGCCTTTCTATTCTTTCCGGTGACAAGAGCATCTTCTATTCTTCCGCTTCTTGGACTCACATCAGAGTCAAGCATCAAGTACCATATTTGGCTTGGACATCTATCCATGGTGCTTTTTGCTGTGCACACTTTAGGTTTCTTCATCTACTGGGGCATCACAGATCAAATGAAAGAGGCACTAGAGTGGAGCAAGACATATGTATCAAATGTAGCTGGGATTATTGCAAGTGTAATTGCATTGGCGATGTGGGTGCCAAGCTTTCCAAGGTTCAGGCGTAAAATGTTTGAGGTTTTCTTCTACAGTCACCATCTCTACACTCTCTACATCTTATTTTATGGCATCCACGTCGGAGTTGAATACATGTGCATGATCGCTCCGGGGATTTTCCTCTTCCTCGTTGACAGACACCTCAGATTCTTGCAATCTCGCCAAAATGCACCGTTGCTATCAGCTCGCATCTTACCCTGTGCTGCACTTGAACTCAACTTCTCCAAGACTCCAAGTTTATACTATAACCCCACGAGCATCGTGTACATAAATGTACCCAAAATTTCCAAGCTGCAGTGGCACCCTTTCACGGTGATCTCTAGTTGTAATATGGAGAAAGATATTCTAAGTGTTGCAATTAAAACTGAGGGTAGCTGGACAAACAAACTCTATCAGGAACTTTCTTCGTCTGCTTTGGATCATCTCAACGTTTCTGTTGAAGGACCCTATGGACCAAGTACTTCACATTTTTTAAGGCACGACGAGCTTGTATTGGTGAGTGGTGGAAGTGGCATCACTCCCTTCATATCCATAATCCGCGAGCTCATATTTCAAAACCAACAAGAATCTCATGTTCCCAGAGTGCTACTTGTTTGTGCTTTCAAAAACTCTGTTGATCTAACCATGTTAGATCTTATGCTTTCTGTTTTTGGCTCAACAACCCAAATCTCAAACCTTCAATTGCAAATCGAGGCCTACGTTACCAGAGAAAAAGAAGAACCTCGAGATTCAGAAAAGCCGATCCAAACCAAATGGTTTAAGCCTGCCCTCTCAGACACTCCTATCTCAGTCGTATTAGGCCCAAACAACTGGCTATGTCTAGCTGCTATAATCTCATCATCCTTTCTCATGTTTCTCCTTCTTTTGGGGATTATCACTCGTTACTACATATACCCTATTGAAAATAACTCAGACGAAGTTTATCATTGGACCTTCAAGGTTTTGTGGTTTTTGTTTCTGCTTTTTGCAGTCATATGTGTATGCTCTAGTGCAGTTTTTCTCTGGTGGAAGAAACAAAACACCTTCGAAAGCAAGCAAATCATGAATGTGGAAATTCCAACACCAACAAGATCACCAGGGCCATGGATATATGGCTCAGAGAGAGAGCTGGAAAGCCTTCCCCATCAGTCTCTAGTGCAAGCAACCAATGTGCATTTCGGTGTAAGGCCTGATCTCAAGAAAATTCTGTTTGATTGCAAAGGCAAAGATATTGGAGTCTTGGTCTGTGGCCCAAGGAACATGAGACATGAAGTTGCCAGAATTTGTTCTTCTGGTTTGGCTGATAATCTTCACTTTGAATCCATCAGCTTTACATGGTGA 2094 0.4226 MRSLTFLKIIFVLVFVGWIMVWILLPTKVYKNTWNPQLENKLNSTYFREQGTNLLLFTFPVVFMGALGSIYLHLHLQKPENLSSKSGGTANRRLSFLRRPFVVMSPIGILTSMELIFALMFAALLIWSLSNYLHISFGHLHMHMEGEKVWQAKLRSVSLRAGYIGNICWAFLFFPVTRASSILPLLGLTSESSIKYHIWLGHLSMVLFAVHTLGFFIYWGITDQMKEALEWSKTYVSNVAGIIASVIALAMWVPSFPRFRRKMFEVFFYSHHLYTLYILFYGIHVGVEYMCMIAPGIFLFLVDRHLRFLQSRQNAPLLSARILPCAALELNFSKTPSLYYNPTSIVYINVPKISKLQWHPFTVISSCNMEKDILSVAIKTEGSWTNKLYQELSSSALDHLNVSVEGPYGPSTSHFLRHDELVLVSGGSGITPFISIIRELIFQNQQESHVPRVLLVCAFKNSVDLTMLDLMLSVFGSTTQISNLQLQIEAYVTREKEEPRDSEKPIQTKWFKPALSDTPISVVLGPNNWLCLAAIISSSFLMFLLLLGIITRYYIYPIENNSDEVYHWTFKVLWFLFLLFAVICVCSSAVFLWWKKQNTFESKQIMNVEIPTPTRSPGPWIYGSERELESLPHQSLVQATNVHFGVRPDLKKILFDCKGKDIGVLVCGPRNMRHEVARICSSGLADNLHFESISFTW 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02444 697 PRINTS Cytochrome B-245 heavy chain signature 239 262 IPR000778 GO:0016020|GO:0016491
Phco6g02444 697 PRINTS Cytochrome B-245 heavy chain signature 264 284 IPR000778 GO:0016020|GO:0016491
Phco6g02444 697 PRINTS Cytochrome B-245 heavy chain signature 613 631 IPR000778 GO:0016020|GO:0016491
Phco6g02444 697 FunFam Ferric reduction oxidase 5 587 696 - -
Phco6g02444 697 PANTHER NADPH OXIDASE 8 695 - -
Phco6g02444 697 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 310 414 IPR017927 GO:0016491
Phco6g02444 697 Gene3D - 595 695 IPR039261 -
Phco6g02444 697 Gene3D - 402 532 IPR039261 -
Phco6g02444 697 SFLD Ferric reductase subgroup (FRE) 7 697 - -
Phco6g02444 697 CDD NOX_Duox_like_FAD_NADP 317 494 - -
Phco6g02444 697 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 419 692 IPR039261 -
Phco6g02444 697 SFLD Ferric Reductase Domain 27 697 - -
Phco6g02444 697 Pfam Ferric reductase NAD binding domain 418 681 IPR013121 GO:0016491
Phco6g02444 697 FunFam Ferric reduction oxidase 3 407 523 - -
Phco6g02444 697 Pfam FAD-binding domain 314 411 IPR013112 GO:0016491
Phco6g02444 697 Pfam Ferric reductase like transmembrane component 162 279 IPR013130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02444 Phco-Chr6 45846791 45851411 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02444 6 45846791 45851411 Phco6g02444 6 45846791 45851411 ECH