Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco6g02435 | ATGAAGAAAGTTGTGTTGAAGGTGGATGTACATGAAGACAAAATCAAGCAGAAAGCTATGAAGACTGTCTCTGGCATTTCAGGTGTGGAGTCAGTTTCTGTGGACATGAAAGACAAGAAATTGACCTTAACAGGGGACATTGATCCAGTAAAAGTAGTTGCAAAGCTAAGGAAGTTTTGTCACGCAGAAATAGTTTCTGTTGGACCGGCAAAAGTGGAAAAGAAGGAAGAACCTAAAAAGGATGATAAAAAGAAGGAAGATGTCAAGAAAGATTCTGCAAAGGCAATCGTTGTAGATCCACTCAAGTTCCATGAAGCATATCCCTATTATTATCAGATGAAACCACAATACAATCCATATTACAGTGCCGTAAGTGTGGAAGAGGATCCTAATGGCTGTGTATTATTTATGAAGGATTTGCGTGGACTTGACTTGGTCATGCTTCTCTCACAAGTCAACCATCTACTCAATGGTCCTCAAACTTATCTTCATCACAACTTCTTTGAAATTGGAAAACCATCTCTTCCTCATTTACATATCTTTCCAATTCCCTTTTCCCTTTCGCATTTTCCCCCAACAATTCTGCTTCTATCTCAGCTCTCTCAAACTTCAATAACAATGAGGAAAGTTGTGTTGAAGGTGAATGTACATGAAGACAAAATCAAGCAAAAAGCTGTGGAGGCTGTGTCGGGCATTTCAGGGGTTGAATCAGTCTTTGTGGATATGAAGAACCAGACATTGACCTTACTTGGAGAAATTGACCCTGCGATTGTAGAGGGCAAGCTGAGAGAGGTGTGTGACACTTCCATACTGTGCGTTGAAGCAGCAAAGGAAGAGAAAAAGGAAGAGAAAAAGGATAAGAATCAGAACGTTGCTGATATTGTGAAGGATTGCGAAAAAGTTGTGCTAAAGGTGGAACTACCGGATGACAAAATTAAAAAAAAAGCCATGAAGGCAGTCTCCAAAATTTCAGGAGTTGAATCAGTGTCATTGGAAATGAAGGAGCAGAAATTAACCTTAATTGGAGACATGGACGCTGTGGTTGTAGTGGAGAAGCTGAGGAAGGTGTGTTACACCGAGATAATCTCTTATGGAGCAGCGAAGGTAGAGAACAAGGAAAAGAAAAAAGAGGAGAAGAAGCAGCCAGAGAACAAGAATAACGATCAAACTCAGAATATTGCTGATATTTTGAAGGCCTACGAAAACTACCATAATCATTATCATTACACAAGTTATGTGGAAGAGAATCCTAATGCGTGTGTCATTTGCTAA | 1272 | 0.3978 | MKKVVLKVDVHEDKIKQKAMKTVSGISGVESVSVDMKDKKLTLTGDIDPVKVVAKLRKFCHAEIVSVGPAKVEKKEEPKKDDKKKEDVKKDSAKAIVVDPLKFHEAYPYYYQMKPQYNPYYSAVSVEEDPNGCVLFMKDLRGLDLVMLLSQVNHLLNGPQTYLHHNFFEIGKPSLPHLHIFPIPFSLSHFPPTILLLSQLSQTSITMRKVVLKVNVHEDKIKQKAVEAVSGISGVESVFVDMKNQTLTLLGEIDPAIVEGKLREVCDTSILCVEAAKEEKKEEKKDKNQNVADIVKDCEKVVLKVELPDDKIKKKAMKAVSKISGVESVSLEMKEQKLTLIGDMDAVVVVEKLRKVCYTEIISYGAAKVENKEKKKEEKKQPENKNNDQTQNIADILKAYENYHNHYHYTSYVEENPNACVIC | 423 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco6g02435 | 423 | SUPERFAMILY | HMA, heavy metal-associated domain | 2 | 59 | IPR036163 | GO:0046872 | |
| Phco6g02435 | 423 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 68 | IPR006121 | GO:0046872 | |
| Phco6g02435 | 423 | Gene3D | - | 1 | 72 | - | - | |
| Phco6g02435 | 423 | Gene3D | - | 203 | 279 | - | - | |
| Phco6g02435 | 423 | Gene3D | - | 299 | 364 | - | - | |
| Phco6g02435 | 423 | Pfam | Heavy-metal-associated domain | 307 | 355 | IPR006121 | GO:0046872 | |
| Phco6g02435 | 423 | Pfam | Heavy-metal-associated domain | 7 | 58 | IPR006121 | GO:0046872 | |
| Phco6g02435 | 423 | ProSiteProfiles | Heavy-metal-associated domain profile. | 207 | 274 | IPR006121 | GO:0046872 | |
| Phco6g02435 | 423 | PANTHER | COPPER TRANSPORT PROTEIN FAMILY-RELATED | 300 | 420 | - | - | |
| Phco6g02435 | 423 | MobiDBLite | consensus disorder prediction | 372 | 391 | - | - | |
| Phco6g02435 | 423 | SUPERFAMILY | HMA, heavy metal-associated domain | 300 | 359 | IPR036163 | GO:0046872 | |
| Phco6g02435 | 423 | Coils | Coil | 270 | 297 | - | - | |
| Phco6g02435 | 423 | ProSiteProfiles | Heavy-metal-associated domain profile. | 298 | 364 | IPR006121 | GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco6g02435 | Phco-Chr6 | 45780629 | 45786719 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco6g02435 | 6 | 45780629 | 45786719 | Phco6g02435 | 6 | 45780629 | 45786719 | ECH |