Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02403 ATGGAGAAGATGCGTCACGCTGAGGAGCTGGTGAGGGAGTTTCTGGTGTTCCGCGGCTTCACCAACACTCTCGAATCATACGAGACTGAATTGCGCACCGACATCGGCAAGGGCTTCGAGGTCAACAAGATCCTCGACCTAATCTTCTCCGTCTACGTTCCTAAGTTCCACGCCGATAAGCTTGTCGCGCTTCTCGGGTTCTTCAAACACTACCTCTCTTCCTCCTCCGACACGCTACTCGTCTCCACGCTCTCGAAGTTGGAGGCTTCTATTCTACGCTTCTACGTCATCCACGCCGTGCAGTGCAACCGCAACGACAAGGTGGTTGAGTTCTTCGCGCTCTACGGTTCCGAATTGTTGCAGAGGTCGCAAGATTGGACTCTCTGGTTCGCAATTCCTTATAAGAAGAACCCGCACATGGATCCCGAGTTTCGGGTTTTTTTCTCCAAGGAGTGGTATCAGGCTTTGCATCTTTCTTCTAGGAACTTCTTCAGCGAGGTTTTCAGTGCTACTCATATCCTTTACATTAATTCTTTTCGTAATTCTAAATTCGTCCTTAATATTGTATCACGTCTACCTGCACTACTGAAGGTTAGTTCGGAGATGAATGCTACTAATATACTGAAAAGAGATATCGTACATTTAAATCTGAAGTTGTCCCAACTTCAGGCTTTGCTTGATGAGAAAGAGGCACAGTTACGTCAATTTAGAAGTATGGAAGGGAGTATTGGTTCATCAAGCAATTTGCGTGAAGAAAGTACCCGTACGGTGAAAAATTCTCCGGATGTTTTTCCAACTAGCATTTCACAAGTAGGTCAAATCGAGGTTAGCCAAGATTTAGCTGTGGGTGAACTCGGAAATGTTCATTCTGAGTTGATTGGCTCCACATCTGGTGATGATGATTCAGCTTCTCTATCGAATGACTGTTTGAGGAACGGCGGAGCTGACAATGCCAGTCTAAAAGAAAACGATGGGGATGAAGATTTTGCTGAGGTCAAAGTAGAGCACCAGGAGACATTTCTGGGGCACACCAGTCCAATCAGTCGTTGTCGCTTCTCTGCATCTGGAAACAATATTGCCAGTGCTTCTCTGGATGGAACTGTCAGGATATGGACATATGATACATCAACTCCAGCGTCTAGAAACGCAACCATATATTGTGGCACTGAAATTTTGTCACTTGACTGGGAATGTAAATCAGACCGCTTGCTTCTTATAGGTACATCCGATGGGTGCATTAAAGCATGGAATGTGGATGCAAAGAGAGTTGTCTGTGATCTCAGCACAACTGAATCATTTCCAAGTGTATTGGACATAAAGTGCAGTCCTGTGGAACCTATTTTTGTGTCTGCAGCAGCATCTGGAGGGGCTGGTTCCAAATATGTTGGCAACCTGGGCTTTGCTTCCTTAACTGTGTGGAACATGAAGACTTGGAAACCCATGACAGTCCTTCCTCTTGGAGAAGATCCCCCGGCAATTACTTCTCTATGCTTTAATCACAATGGAAAGATTTTGGCAGCTTCTGCAGTTGATGGAATGATTCACATGTTTGACATGTCTGCTGGTCTACAAATCACTGGCTGGCCAGCACATGATTCTTCCATCACTTCTATTCTGTTTGGACCAGACGAGACTAGCATTTTTAGCCTTGGCTCTGATGGGAAGATTTTTGAGTGGAGTTTGCAAAATCAAGGTCAAATCTTGTGGTCGATAGACTGTAGTAGGTTCTGTTACCCCTTCATCGGTTCAAAATATTGCAGACATGAGATGGCATTAGATGCAAATGGGAGGAGACTCTTGGTAACATCCAGTTCAGTGAGAGCACCCATATATCAGGTTCATGGTCATCTAAATGGTTGGAGAACACTTCCGCACGGTGCTCCTATTACTGCTGTGGATTGGCATCCTACCCTGCCCATTTTCTTGACTGGATCAGCTGATAATTCCGTCCGAGTAACATCTTTGTCATAG 1971 0.4526 MEKMRHAEELVREFLVFRGFTNTLESYETELRTDIGKGFEVNKILDLIFSVYVPKFHADKLVALLGFFKHYLSSSSDTLLVSTLSKLEASILRFYVIHAVQCNRNDKVVEFFALYGSELLQRSQDWTLWFAIPYKKNPHMDPEFRVFFSKEWYQALHLSSRNFFSEVFSATHILYINSFRNSKFVLNIVSRLPALLKVSSEMNATNILKRDIVHLNLKLSQLQALLDEKEAQLRQFRSMEGSIGSSSNLREESTRTVKNSPDVFPTSISQVGQIEVSQDLAVGELGNVHSELIGSTSGDDDSASLSNDCLRNGGADNASLKENDGDEDFAEVKVEHQETFLGHTSPISRCRFSASGNNIASASLDGTVRIWTYDTSTPASRNATIYCGTEILSLDWECKSDRLLLIGTSDGCIKAWNVDAKRVVCDLSTTESFPSVLDIKCSPVEPIFVSAAASGGAGSKYVGNLGFASLTVWNMKTWKPMTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMFDMSAGLQITGWPAHDSSITSILFGPDETSIFSLGSDGKIFEWSLQNQGQILWSIDCSRFCYPFIGSKYCRHEMALDANGRRLLVTSSSVRAPIYQVHGHLNGWRTLPHGAPITAVDWHPTLPIFLTGSADNSVRVTSLS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02403 656 ProSiteProfiles Trp-Asp (WD) repeats profile. 340 381 IPR001680 GO:0005515
Phco6g02403 656 ProSiteProfiles Trp-Asp (WD) repeats profile. 622 656 IPR001680 GO:0005515
Phco6g02403 656 Gene3D - 289 456 IPR015943 GO:0005515
Phco6g02403 656 SMART WD40_4 477 518 IPR001680 GO:0005515
Phco6g02403 656 SMART WD40_4 616 654 IPR001680 GO:0005515
Phco6g02403 656 SMART WD40_4 333 372 IPR001680 GO:0005515
Phco6g02403 656 SMART WD40_4 378 417 IPR001680 GO:0005515
Phco6g02403 656 SMART WD40_4 521 560 IPR001680 GO:0005515
Phco6g02403 656 Pfam Anaphase-promoting complex subunit 4 WD40 domain 490 540 IPR024977 -
Phco6g02403 656 Gene3D - 457 656 IPR015943 GO:0005515
Phco6g02403 656 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 622 656 - -
Phco6g02403 656 Pfam WD domain, G-beta repeat 337 371 IPR001680 GO:0005515
Phco6g02403 656 Pfam WD domain, G-beta repeat 615 652 IPR001680 GO:0005515
Phco6g02403 656 SUPERFAMILY WD40 repeat-like 329 652 IPR036322 GO:0005515
Phco6g02403 656 PANTHER OS05G0299300 PROTEIN 1 655 - -
Phco6g02403 656 Coils Coil 212 239 - -
Phco6g02403 656 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 340 375 - -
Phco6g02403 656 ProSiteProfiles Trp-Asp (WD) repeats profile. 528 563 IPR001680 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02403 6 45411834 45418781 Phco6g02403 6 45411834 45418781 ECH