Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02402 ATGGATGCCTATGTCTGTGTTAAATTTAGGTTCCTTATACTTTGTTCACTATTTACAATAATGTCTGGTTCTGTCATGTCCAATTCCAAGATTCATTGCAACAAGAAAGATATGGACACACTCCTGCTCTTCAAACAAGGACTCACAGATCCTTCAGGCGTGTTCTCCTCATGGATCTCAAACTCAGATTGTTGTCAATGGACTGGAGTCAAATGTGATAATATCTCTGGTAAAGTTACAAATCTTGATCTCCCCTGTCACACAAATCACCCTAAAGTTGTTGATTTTGGAGATAAGGAGGACAAATCACACTGCCTAACAGGAGCATTCAGCTTGTCTTTGTTGGAACTTGAATCTTTGAGTTACTTGAATTTGAGCAACAATAACTTCAAGTTCATGCAATATAGTTCAATGGGCAGTCAGAAATGTGATGACTTGTCGAGAGGTAACCTTTCTGGTCTGTGTGGAAACTCCACCAATCTCCAGTATCTAGATTTATCACAAAATTATGATCTTTTTGTCAGTAATCTCGATTGGATTTCCCATCTTACCTCATTGCAATATCTTAACCTTGGTGGTGTTCATCTTCACCAGGGCATTGACTGGCTTCAATCAGTGACCATGCTCCCTTCACTTTTGGAGTTACACTTCAAGAGTTGTAAACTTGAAAACCTCTATCCATTTCTTCAACATGCCAATTTCACTTCACTTCAAGTTCTAAATCTTGCTGAAAACCATTTTATATCAGAGTTGCCTACTTGGTTATTCAATCTTAGTTGTGAAATCTCTCGCATTGACCTTAGTCAAAATCAGATACATAGCCAACTACCCAAAACACTACCATATCTCAGAAGTCTCAAGTCCTTGGTTTTGCATGATAATTTTCTCAAAGGACCCATTCCAAGTTGGCTAGGGCAGCTTGAACAACTACAAGAACTTGATCTTTCTCATAATTCTTTTTCTGGTCCAATCCCTGCAAGTTTAGGAAATTCACCATCATTGATTAAATTAATACTCGAGTCAAATGATTTGAATGGAAATCTTCCAGTGGAGCTAGGACAACTCTTCAAATTGGAAACCCTTAGAGTTTCAAACAATCCCTTAACTGGAATTGTGTCTGAAAGAAATTTGCGTTCTTTAAGAAATTTAAAGAACTTTTCCCTGAGTTCACCAGCCTTGATCTTTGACTTTTATCCTAAGTGGGTCCCTCCTTTTCAACTTCTAAATATTGAATTGGGTTATTTGAGAGACAAACTTCCTGCATGGCTATTCACACAAAGCTCTCTAAAATATCTAACCATAAGACACTCAACTGCTTCATTTGAACCTCTTGACATGTTTTGGAAATTCGCTAATCGTCTTGAATCTATCTCTTTGGAAAACAACACGATAAATGGGGACATGTCAAAGGTGTTTCTAAGTTCAAAAGTGGTTTGGTTAGGGGCCAATAATTTAAGAGGTGGCATGCCGCATATATCACCAGAAGTGGTTGTCTTACACTTACGTAATAACTCACTGTCAGGATCCATTTCTCCTCTTTTGTGTCATAATATGAGACATAAAAGCAATTTAGTGTACTTGGACATGAGTTATAATAATTTATCAGGAGGACTCACAGATTGTTGGAATAATTGGAAATCATTGGTTCTTGTGAATCTAAGGTTCAACAACCTCACAGGCAAGATTCCTCACTCAATGGGTTCCTTGTCTAACCTTCGTTTTCTGTATCTGAAAAGTAATAAGTTCTTCGGAAAGGTGCCCTTTTCACTAAGAAAATGCAAGAATCTTCGGATACTTGATCTATGTCGCAATAATCTTTCTGGGGTAATACCAAGTTGGTTGGGGCAAAATGTTGAAGGTCTTGAATTGAGATCCAATCAATTCAGTGGCAATATTCCCACGCAACTATGTCAACTTCATTCTTTAATGATGATAAATTTGGCGAGTAATAAATTATCAGGACCAATACCCAATTGTTTACACAACATCAAAGCCATGCTTTCTAGTTCTTTTGTAACTCGTAAGTGCCACTTTACCCTTAATTATCCGGGTTTATCAGTGTACATTATCTGTAGCATTCCAATGCTTATAAAGGGAAACGAGTTATCATATGTTAATGTGATGAATTCCATTGATCTCTCAAGCAACAACTTCTCTGGAAGTGTGCCTCTGGAGATATATATGCTCACTGGATTACAGTCCTTGAATTTGTCCCATAATCAATTGATTGGAACGATACCAGATGAGATTGGCAACTTGGAACAGTTGGAGTCCATTGATCTTTCATCAAATAATTTCTCTGGACAAATTCCACAGTCCATGTCTGCTTTGCATTTTCTTGCAGTCTTGAATCTATCATTCAACAATTTCATGGGCAAAATCCCAGCAGGGACTCAACTTGGTTCTACAAATCTTAGCTATATCCACAATCCTGACCTATGTGGACCTCCACTTACTAAGATATGTCCCCAAGATGAAAAATCCAACAATATAAAATCTATGGGAGGAGATGATAGTGATGATGACAAATGTCAGGTGCATTCAAGGTTCTACATGGGACTAGGAATAGGATTTGCTGCAGGATTTTGGGGACTATTGTGCACCGTTTTAATCAGCAGAAAATGCAGACATGCTTATTTTAAATTGTTGCACCGAATTTGTGACCATGTGATCCAAAAGATAAACTCCATTACTGAAATGTAG 2703 0.377 MDAYVCVKFRFLILCSLFTIMSGSVMSNSKIHCNKKDMDTLLLFKQGLTDPSGVFSSWISNSDCCQWTGVKCDNISGKVTNLDLPCHTNHPKVVDFGDKEDKSHCLTGAFSLSLLELESLSYLNLSNNNFKFMQYSSMGSQKCDDLSRGNLSGLCGNSTNLQYLDLSQNYDLFVSNLDWISHLTSLQYLNLGGVHLHQGIDWLQSVTMLPSLLELHFKSCKLENLYPFLQHANFTSLQVLNLAENHFISELPTWLFNLSCEISRIDLSQNQIHSQLPKTLPYLRSLKSLVLHDNFLKGPIPSWLGQLEQLQELDLSHNSFSGPIPASLGNSPSLIKLILESNDLNGNLPVELGQLFKLETLRVSNNPLTGIVSERNLRSLRNLKNFSLSSPALIFDFYPKWVPPFQLLNIELGYLRDKLPAWLFTQSSLKYLTIRHSTASFEPLDMFWKFANRLESISLENNTINGDMSKVFLSSKVVWLGANNLRGGMPHISPEVVVLHLRNNSLSGSISPLLCHNMRHKSNLVYLDMSYNNLSGGLTDCWNNWKSLVLVNLRFNNLTGKIPHSMGSLSNLRFLYLKSNKFFGKVPFSLRKCKNLRILDLCRNNLSGVIPSWLGQNVEGLELRSNQFSGNIPTQLCQLHSLMMINLASNKLSGPIPNCLHNIKAMLSSSFVTRKCHFTLNYPGLSVYIICSIPMLIKGNELSYVNVMNSIDLSSNNFSGSVPLEIYMLTGLQSLNLSHNQLIGTIPDEIGNLEQLESIDLSSNNFSGQIPQSMSALHFLAVLNLSFNNFMGKIPAGTQLGSTNLSYIHNPDLCGPPLTKICPQDEKSNNIKSMGGDDSDDDKCQVHSRFYMGLGIGFAAGFWGLLCTVLISRKCRHAYFKLLHRICDHVIQKINSITEM 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02402 900 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 699 822 - -
Phco6g02402 900 PANTHER LRR RECEPTOR-LIKE KINASE 263 349 - -
Phco6g02402 900 ProSiteProfiles Leucine-rich repeat profile. 357 378 IPR001611 GO:0005515
Phco6g02402 900 SMART LRR_typ_2 753 777 IPR003591 -
Phco6g02402 900 SMART LRR_typ_2 593 617 IPR003591 -
Phco6g02402 900 SMART LRR_typ_2 234 258 IPR003591 -
Phco6g02402 900 SMART LRR_typ_2 117 141 IPR003591 -
Phco6g02402 900 SMART LRR_typ_2 729 752 IPR003591 -
Phco6g02402 900 SMART LRR_typ_2 355 376 IPR003591 -
Phco6g02402 900 SMART LRR_typ_2 307 331 IPR003591 -
Phco6g02402 900 SUPERFAMILY L domain-like 476 801 - -
Phco6g02402 900 Gene3D Ribonuclease Inhibitor 34 351 IPR032675 -
Phco6g02402 900 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Phco6g02402 900 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 472 679 - -
Phco6g02402 900 Pfam Leucine rich repeat 732 790 IPR001611 GO:0005515
Phco6g02402 900 Pfam Leucine rich repeat 595 652 IPR001611 GO:0005515
Phco6g02402 900 Pfam Leucine rich repeat 284 344 IPR001611 GO:0005515
Phco6g02402 900 Gene3D Ribonuclease Inhibitor 373 825 IPR032675 -
Phco6g02402 900 SUPERFAMILY L domain-like 60 389 - -
Phco6g02402 900 PRINTS Leucine-rich repeat signature 729 742 - -
Phco6g02402 900 PRINTS Leucine-rich repeat signature 310 323 - -
Phco6g02402 900 FunFam Leucine-rich repeat receptor protein kinase EMS1 300 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02402 Phco-Chr6 45404555 45407257 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02402 6 45404555 45407257 Phco6g02402 6 45404555 45407257 ECH