Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02341 ATGGAAGAGTTTGGGGGTTTTAGTTCAGTGCCTCTCCACTCGGGACTTGTTAGCCGTAGCAGCAGGAGCAGACTCAGGATGTCTCACAGGAAGTTCGAACACCCAAGGCACGGGTCTCTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGTGAAGTCATTCCCCAAGGATGATCAATCCAAGTCACCCAAGTTGACTGCATTCTTGGGTTACAAGGCTGGTATGACTCACATTGTTCGAGAGGTCGAGAAGCCAGGATCAAAGCTTCACAAGAAGGAAACTTGTGAGCCTGTTACAATTATTGAGACCCCTCCAATGGTTGTTGTTGGTGTTGTGGGTTATGTGAAAACTCCCCGTGGTCTTCGTACATTGAACACTGTGTGGGCTCAGCACTTGAGTGAGGAACTGAAACGTAGGTTCTATAAGAACTGGTGCAAGTCAAAGAAGAAGGCTTTCACCAAATACTCAAAGCAGTATGAAACTGACGAGGGAAAGAAAAACATTGAGACTCAGCTGGAGAAACTAAAGAAGTATTCTACCGTGATTCGTGTTTTAGCTCACACCCAGATCAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCCCATGTCATGGAAATTCAGGTTAATGGTGGTTCTATTGCACAGAAGGTGGACTTTGCGTACAGTTTCTTTGAGAAACAGGTCCCTATTGATGCTGTGTTCCAGAAAGATGAGATGATTGACGTCATAGGAGTGACAAAGGGTAAGGGTTATGAGGGTGTTGTAACTCGTTGGGGTGTTACACGTCTTCCTCGTAAGACTCACAGGGGTTTGAGGAAGGTGGCTTGTATTGGTGCCTGGCACCCTGCCAGAGTTTCATTCACTGTTGCCAGGGCTGGTCAGAATGGATACCACCACAGAACTGAGTTGAACAAAAAGGTTTACAAGCTTGGCAAAGCTGGGGATGAGTCTCACTCTGCTCTTACTGAGTTTGATAGGACCGAGAAAGACATTACCCCAATGGGTGGTTTCCCTCACTATGGTATTGTGAAGGATGATTTTATAATGGTGAAAGGTTGCTGTGTTGGACCCAAGAAAAGGGTTCTTACATTGCGCCAATCCCTGCTCAAGCAGACTTCTCGTGTTGCCCTTGAGGAGATCAAACTCAAGTTTATCGACACCTCCTCAAAGTTTGGACACGGTCGCTTCCAGACCACACAGGAGAAGCAGAAGTTCTTTGGACGCCTCAAAGCATAA 1248 0.4679 MEEFGGFSSVPLHSGLVSRSSRSRLRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDQSKSPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYKNWCKSKKKAFTKYSKQYETDEGKKNIETQLEKLKKYSTVIRVLAHTQIRKMKGLKQKKAHVMEIQVNGGSIAQKVDFAYSFFEKQVPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALTEFDRTEKDITPMGGFPHYGIVKDDFIMVKGCCVGPKKRVLTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02341 415 ProSitePatterns Ribosomal protein L3 signature. 238 261 IPR019926 -
Phco6g02341 415 Gene3D Ribosomal protein L3, domain 3 27 300 IPR044892 -
Phco6g02341 415 FunFam 60S ribosomal protein L3 70 185 - -
Phco6g02341 415 FunFam 60S ribosomal protein L3 109 233 - -
Phco6g02341 415 FunFam Ribosomal protein L3 291 415 - -
Phco6g02341 415 Pfam Ribosomal protein L3 27 396 IPR000597 GO:0003735|GO:0005840|GO:0006412
Phco6g02341 415 FunFam 60S ribosomal protein L3 252 300 - -
Phco6g02341 415 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 27 410 IPR045077 GO:0003735|GO:0005840|GO:0006412
Phco6g02341 415 SUPERFAMILY Translation proteins 30 396 IPR009000 -
Phco6g02341 415 Gene3D - 109 233 - -
Phco6g02341 415 FunFam 60S ribosomal protein L3 27 100 - -
Phco6g02341 415 Gene3D Translation factors 70 411 - -
Phco6g02341 415 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02341 Phco-Chr6 44609681 44612719 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02341 6 44609681 44612719 Phco6g02341 6 44609681 44612719 ECH