Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02322 ATGAAAGCCAATCCTCATTCAACCAGCACCGATAGCAGCGGCGGCGACCGTCACTCTCCAACTATACTTCCGCGGCGAAAATGGTTTGTCCCCATCTCGTCTCACCTCTCACTGCGCGACGCTCTGGTGGCGAACGAGGAGTTCCAGCACATTCTCCGTGTGCTGAACACTAACGTCGATGGCAAGCAGAAGATAATGTTTGCCCTTACCTCCATCAAGGGTATTGGTAGGAGATTCGCCAACATGGTTTGCAAGAAGGCTGATGTTGACATGAACAAGAGGGCTGGTGAGTTGAGTGCTGCTGAGTTGGATAATCTGATGACTGTGGTGGCCAACCCAAGGCAATTCAAAATCCCAGACTGGTTTCTTAACAGGAAGAAGGATTACAAGGATGGCAAGTACTCCCAGGTTGTGTCCAATGCTCTCGATATGAAGCTCAGGGATGACTTGGAGAGACTCAAGAAAATCAGAAACCACCGTGGATTGAGGCACTACTGGGGCCTTCGAGTCCGTGGTCAGCACACCAAGACCACTGGCCGTAGGGGGAAGACTGTTGGTGTCTCTAAGAAGCGTTAA 576 0.5104 MKANPHSTSTDSSGGDRHSPTILPRRKWFVPISSHLSLRDALVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANMVCKKADVDMNKRAGELSAAELDNLMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02322 191 Hamap 30S ribosomal protein S13 [rpsM]. 51 191 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Phco6g02322 191 FunFam 40S ribosomal protein S18 40 119 - -
Phco6g02322 191 Gene3D 30s ribosomal protein s13, domain 2 131 181 IPR027437 -
Phco6g02322 191 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 42 191 - -
Phco6g02322 191 Gene3D - 41 119 - -
Phco6g02322 191 MobiDBLite consensus disorder prediction 1 20 - -
Phco6g02322 191 MobiDBLite consensus disorder prediction 1 17 - -
Phco6g02322 191 SUPERFAMILY S13-like H2TH domain 52 187 IPR010979 GO:0003676
Phco6g02322 191 ProSitePatterns Ribosomal protein S13 signature. 160 173 IPR018269 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Phco6g02322 191 Pfam Ribosomal protein S13/S18 53 181 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Phco6g02322 191 ProSiteProfiles Ribosomal protein S13 family profile. 54 184 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Phco6g02322 191 FunFam 40S ribosomal protein S18 131 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02322 Phco-Chr6 44434112 44437391 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02322 6 44434112 44437391 Phco6g02322 6 44434112 44437391 ECH