Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02278 ATGAATACATTTCCCTCTCAGTATGCAATCTTCTTTGCCTGGTTTTTATGGGCAATCATGTTCAGCACTGGCATGTGCAACTCAAATATCCGCTGCAACCACAAAGACAAGGAAGCTCTCTTAAAGTTCAAGCAAGGAATCAAAGATCCAGCAGGTGTGCTCTTTTCATGGTCCACTGAACAAGATTGTTGTGAATGGAAAGGAGTCATGTGTGACAATTTCACAAGTAGAGTCACTCACCTCAGTCTCCCTTGTTCTACAACTCTTCCAACTTACGTTGATACGATAGATAGATCACACTGCCTCACAGGTTCCGTTTACCTGTCCTTGTTTGTTGTGGAGTTTGAATTTCTATATCACTTGAATTTGAGTAATAATAACTTCTCAGCCATCCAATTTGGTTCTCTTGATTGTCATAATCTATCTATTGGTACTCCTTCTCATCAATGTGTAAACTCTTCGGTTCTTCGTTATCTTGATTTATCATTCAACCATGGTGCCATCACTAGTCTTCAATGGCTTTCTCATTTTTCCTCCTTGAAATATCTTAACCTTGATGCCATTGATCTTCACGAGGAAACCAAATGGCTTCAATTAGTCACCATGCTTCCATCACTTTTAGAGCTCCACATGCGTAATTGTCATCTTAAAGACTTGAGTCCCTCTCTTCAATATGCTAATTTTACTGCACTCAAAGTTCTTTCTCTTCCTGGAAATGATTTTCATTCGAAGTTACCAAAATGGCTATTCAATTTAAGTGGTATCTCTTCTATTGACCTCGGGTCAAATATTTTAGAAGGCCAACTACCTGAGGCGTTGTTAAATCTTGAACACTTGGAAGTCTTGAATTTGAATGGTAATCACTTCAATGGACCAATTCCACATTGGTTAGGAGAATTTGAACATCTGCAACATCTTAATCTTAGAAAAAACATGTTTTCTGGATCTATTCCCACAAATTTGGGAAATCTATCATCCTTACTTTTCTTGGCGGTTAGTTCAAATAGATTGACAGGAGTTGTGTCTGAGAAAACTTTGGTGAGACTGTCAAAATTGAAGGAGTTAGCTATATTCATATCACCACCATTAATCTTTGATTTTGACTCCCACTGGGTTCCACCTTTTCAACTTGAGCGATTAAGTCTTGCATTTTCAGGTCCTAAAATTCCTGTCTGGTTATACACACAAAAGTCTCTTGAATATTTAAGTATTTATGAATCATCATTTGAGGCTAAAGGGAAGTTTTGGAATTTTCTGTCAAGAATGAAAGAAGTCCATTTAGAACATAATTCTATAGATGGGAACTTGTCAAACATGGTGTTGAATTCTACTTTCATATCATTGTCATCAAATGATCTGAAGGGTTGGTTGCCTCGATTGTCATCCAATGTGGTCGTTGTTCGGTTGTCAAACAACTCGTTATCAGGAAACATGTCTTCTCTCTTGTGTGATGATAAGATGTTGAATGGGAAAAGTAATTTGGTGTACTTAGACATATCACTTAATCTTCTGTCAGGAGGTCTTACAAATTGTTGGGAAAATTGGAAATCTTTGGTTCATGTTAATTTGGGAAGCAATAATTTAACAGGCAAGATACCCCCATCAATTGGCTTGTTATCTAATCTTACATCATTCCATCTACATGAAAATAAGCTCTATGGAGAGATTCCTTCCTCGCTGGAAAATTGCCACTCTCTGTTAATCTTTAATGTTCGTGAAAACAACTTTTCAGGAAACATACCAAATTGGATACCTCATGCTGCAAAAGTTCTCCAATTAAGATCCAATCATTTTACAGGAAATATCCCAGCACATATATGCCAAATGTCTTCCCTAATTGTTTTGGATATTGCAAATAACACAGTCTCAGGACATATACCCAACTGCCTTCACAATATGACAACCTTAGTTTCCAGCAAAACTTCACGTGACAAGCTTTCTTTTTTCTTTTCCAGGCGTGATGGTTACCGCTACACCTTTGAAGACAATCTTGAGCTGGTTATAAAGGGTCAAGCATTAGAATATGGAAAAAACCTGCACTTTATGAGCTTAATTGATATGTCAAGTAACAATTTGTCTGGAACATTGCCTCTCCAAATGTTTACCCTCACTGGATTATGTTCCTTGAACTTGTCTCACAATAAATTAACAGGAAAAATACCAGATAAGATTGGAAACATGAACAATTTGGAGTCCCTTGATTTCTCAGCAAACCAACTTTGGGGTGAAATTCCCCAAACTCTATCAAATTTGTCCTTTTTGAGTTACTTAAACCTGTCATTCAACAATTTCAAAGGCGAAATACCACCAGGAACACAACTTCAAGGGTTCAGTGCCCTTAGCTATATAGGTAATCGTGATCTTTGTGGTCCTCCACTGACAAATATATGCTTCCAAGATGGTGAATCTAAAGAAGCAAAGCAAAATCACGATGAGGATAGATCTGAATTTTTGTCATGGTTTTATATTGGAATAGAAAGTGGATTTGGCACAAGCTTTTTGGGAGTTTGCTGTGCCCTTCTCTTAAATAGAAAATGGAGGCATGCTTACTTCAGGTTTCTCTATGGCATTCCTCATTCTTCAAAAGGGAATAAGTTAAAGACAGTGATGGAGGGAGAGAACAGTGAGAAAGCAATGGCTATGATGGTGAAGAGTAACAAGAGCACCACCTCCTTAACTGTCCCCAATCTCTTCCTCTTTTTCACCCTCCTCTCCCTTTTCTCCCTCTTCATCTTCCTCTTCTTCTCCACTGCCACAACCCTCCACTCCTCTCCCTCTCCTGACGATTCTCCCAACATCAACGTCTACGTCGCCGACCTCCCCCGATCCCTCAATTACGACCTCCTCCACCGTTACTGGACCTCATTCTCCGATTCCCGACTCCCCACCGACGCAGATCACCAGGCTCCCCTCTCCCTCCATCCAACGGCCAAATTCCCGCCCTACCCCGACAACCCTCTCATCAAACAGTACAGCGCGGAGTACTGGATCACGGGCGACCTTATGACCCCACCTCAACACCGCGCCACTTCCTTCGCCAAGCGCGTCCTCGACCCGCGCCTCGCCGACGTCGTTTTCGTTCCGTTCTTCGCCACGCTCAGCGCGGAGATGCAGCTCGGAGCGAACAGGGGCGCGTTCAGGAAGAAGACCGGGAACGAGGATTACAAGCGGCAGAGGGAGGTCATGGACGCCGTTAGAAGCACCCAGGTCTGGAACCGTTCCGGCGGACGAGATCACGTGTTTGTGCTAACCGACCCGATGGCCATGTGGCATGTCAAAGATGAGATTGCCCCTGCTGTTTTGCTTGTTGTGGATTTTGGTGGTTGGTATAGGCTTGACTCCCGAGGTTCTAACTGTAGCGAGAGTGGTGTGGTCCCTCATACTCAAGTTTCTGTGATTAAAGATGTGATTGTGCCTTACACGCATTTGCTTCCGAGGTTGGATTTGTCACAAAACAAGGAGCGTCACCAGCTTCTGTATTTCAAAGGAGCGAAACATAGGCACCGGGGAGGTATAATTAGAGAGAAGTTATGGGATCTAATGATTAATGAGCCTGGTGTTATAATGGAAGAAGGTTTCCCTAATGCAACTGGCCGAGATCAATCGATAAAAGGGATGAGAACATCAGAATTTTGTCTGCATCCTGCTGGAGATACACCGACTTCATGCCGACTTTTTGATGCAATACAAAGTCTTTGTATACCTGTCATTGTCAGTGACAACATTGAGCTTCCATTTGAAGGTATGGTGGATTATTCGGAATTTTCAGTCTTTGTTGCAGTTAGTGATGCACTGAAACCAAACTGGCTTGTCAATCATCTTAAAAGTTTTTCAAAAGAGCAGAAAACTAGGTTCCGCCAAAATATGGCTCAGGTACAGCCCATTTTTGTCTATGATAGTGGTCATCCTGGTGGTATTGGACCAATACCTTCGGATGGTGCAGTGAATCACATATGGAAGAAAGTTCACCAAAAGCTGCCAACGATAAAAGAAACCATAATTCGAGAGAGAAGAAAGCCACCTGGTGTTTCAGTTCCACGACGTTGTCATTGTACTTGA 4059 0.4171 MNTFPSQYAIFFAWFLWAIMFSTGMCNSNIRCNHKDKEALLKFKQGIKDPAGVLFSWSTEQDCCEWKGVMCDNFTSRVTHLSLPCSTTLPTYVDTIDRSHCLTGSVYLSLFVVEFEFLYHLNLSNNNFSAIQFGSLDCHNLSIGTPSHQCVNSSVLRYLDLSFNHGAITSLQWLSHFSSLKYLNLDAIDLHEETKWLQLVTMLPSLLELHMRNCHLKDLSPSLQYANFTALKVLSLPGNDFHSKLPKWLFNLSGISSIDLGSNILEGQLPEALLNLEHLEVLNLNGNHFNGPIPHWLGEFEHLQHLNLRKNMFSGSIPTNLGNLSSLLFLAVSSNRLTGVVSEKTLVRLSKLKELAIFISPPLIFDFDSHWVPPFQLERLSLAFSGPKIPVWLYTQKSLEYLSIYESSFEAKGKFWNFLSRMKEVHLEHNSIDGNLSNMVLNSTFISLSSNDLKGWLPRLSSNVVVVRLSNNSLSGNMSSLLCDDKMLNGKSNLVYLDISLNLLSGGLTNCWENWKSLVHVNLGSNNLTGKIPPSIGLLSNLTSFHLHENKLYGEIPSSLENCHSLLIFNVRENNFSGNIPNWIPHAAKVLQLRSNHFTGNIPAHICQMSSLIVLDIANNTVSGHIPNCLHNMTTLVSSKTSRDKLSFFFSRRDGYRYTFEDNLELVIKGQALEYGKNLHFMSLIDMSSNNLSGTLPLQMFTLTGLCSLNLSHNKLTGKIPDKIGNMNNLESLDFSANQLWGEIPQTLSNLSFLSYLNLSFNNFKGEIPPGTQLQGFSALSYIGNRDLCGPPLTNICFQDGESKEAKQNHDEDRSEFLSWFYIGIESGFGTSFLGVCCALLLNRKWRHAYFRFLYGIPHSSKGNKLKTVMEGENSEKAMAMMVKSNKSTTSLTVPNLFLFFTLLSLFSLFIFLFFSTATTLHSSPSPDDSPNINVYVADLPRSLNYDLLHRYWTSFSDSRLPTDADHQAPLSLHPTAKFPPYPDNPLIKQYSAEYWITGDLMTPPQHRATSFAKRVLDPRLADVVFVPFFATLSAEMQLGANRGAFRKKTGNEDYKRQREVMDAVRSTQVWNRSGGRDHVFVLTDPMAMWHVKDEIAPAVLLVVDFGGWYRLDSRGSNCSESGVVPHTQVSVIKDVIVPYTHLLPRLDLSQNKERHQLLYFKGAKHRHRGGIIREKLWDLMINEPGVIMEEGFPNATGRDQSIKGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMVDYSEFSVFVAVSDALKPNWLVNHLKSFSKEQKTRFRQNMAQVQPIFVYDSGHPGGIGPIPSDGAVNHIWKKVHQKLPTIKETIIRERRKPPGVSVPRRCHCT 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02278 1352 Pfam Exostosin family 931 1273 IPR040911 -
Phco6g02278 1352 FunFam Inactive leucine-rich repeat receptor-like protein kinase 245 343 - -
Phco6g02278 1352 SUPERFAMILY L domain-like 447 794 - -
Phco6g02278 1352 PANTHER LRR RECEPTOR-LIKE KINASE 232 339 - -
Phco6g02278 1352 Gene3D Ribonuclease Inhibitor 33 343 IPR032675 -
Phco6g02278 1352 SUPERFAMILY L domain-like 32 357 - -
Phco6g02278 1352 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 392 649 - -
Phco6g02278 1352 Gene3D Ribonuclease Inhibitor 359 800 IPR032675 -
Phco6g02278 1352 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 674 797 - -
Phco6g02278 1352 SUPERFAMILY L domain-like 377 481 - -
Phco6g02278 1352 SMART LRR_typ_2 203 225 IPR003591 -
Phco6g02278 1352 SMART LRR_typ_2 751 774 IPR003591 -
Phco6g02278 1352 SMART LRR_typ_2 703 727 IPR003591 -
Phco6g02278 1352 SMART LRR_typ_2 228 252 IPR003591 -
Phco6g02278 1352 SMART LRR_typ_2 276 300 IPR003591 -
Phco6g02278 1352 SMART LRR_typ_2 115 138 IPR003591 -
Phco6g02278 1352 SMART LRR_typ_2 539 563 IPR003591 -
Phco6g02278 1352 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02278 Phco-Chr6 44025071 44031837 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02278 6 44025071 44031837 Phco6g02278 6 44025071 44031837 ECH