Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02275 ATGAATACATCACTCTCTCTGTATGCAACCCTTTTTGCATGGTTGCTATACGCAATCATGTTGAACAAGGTCACTTGCAGTTTCAATATCCGTTGCCACCAAAAAGACAAGCAAGCTCTCTTTAACTTCAAGCAAGGAATCATAGATCCATCACACGCTCTCTCTTCATGGTTCACCCAACAAGATTGTTGTCAATGGAGAGGAGTGACATGTGACAACATCACAAGTAGAGTCACTCACCTTAGTCTTCCATGTTCTACAACTCTTCCAACTTATACTGATAAAACAAATAAGTCACTCTGCCTCACAGGTTCTATTTACTTATCTTCTATGGACTTTGAATTTCTCAGTTACTTGGATTTGGGGAATAATGACTTCTTAGCTTTCCAATTTGATTCTGTGACTCATAACTATCAGAACCAATCTGTAGCAGTTCATCCTCGTAGGTTTGTCAACTCTTCAGCTCTTCGATATCTTGATTTATCAGGTAACGAAAATCTAGCCATGAATAGTCTTCAATGGCTTTCTCGCATGTCCTCCTTGGAACATCTCAACCTAGGTGGCATTGATCTTCACAAAGAAACTAATTGGCTTCAAGTAGTTACCATGCCATCATCACTTTCTGAGCTTTACTTGATGGGTTGTCAACTTGAAAATTTGAGTCCCTCTCTTAAATATGCAAATTTTAGTGCGCTTAGATATCTTGCGCTTTCTGAAAATGAATTTCACTCAGAGTTGCCTAAATGGTTATTCAATATTAGTCATGGTATCTCTCGTATTGAATTTAGATCATGTTCTTTAAGAGGCCAACTGCCAAAGGAATTGTTAAATCTTCGAGATCTGGAAGCTCTAGTCTTGGAAGATAATAACTTCAATGGACCAATTCCAGATTGGTTGGGCGAACTTGAACACCTGCAATATCTTATTCTTGGATCAAACTTGTTTTCTGGATCTATGCCCACAAAATTGGGAAATCTATCATCATTAATTTCCTTGACTGTTGGTGGAAATCAACTTGCAGGAGTCGTGTCAGAGAGAAATTTTGCCAAAATGTCAAAATTAAAGGAGATGGATATATACTTATCACCTCCATTAATCTTTGATTTTGACCCCCACTGGGTTCCACCTTTTCAACTTGCACAGATACTTCTTGGATTTGCAGGTCCTAACTTTCCTATGTGGTTATATACACAGAGATCTCTTGAAAGTTTAGCTATTGTGGAATCATCATTTGAGGCACAGGGCAAATTCTGGAATTTTGTATCAAAAGTTCCTGAAGTCCAAATAGAAGAGAATTTGATTGATGGGAACCTGTCAAACGTGGTTTTGAACTCTTCATACATAGATTTATCTTCAAATGGCTTGAAAGGTGGCTTGCCTCGGTTATCATCCAACGTGGCTGTTGTCTTGTTATCAGACAACTTGTTATCAGGAGACCTCACCCCCCTCTTGTGTGATCATAAGATGTTGAGTGCGGAAAGCAATTTGCTCTACTTGGACATATCTTTGAATCATCTATCTGGAGGGCTTACTAGTTGTTGGAGGAACAAGAAATCTCTGGTTCATGTTAACTTAGGAGGCAATAATCTAACAGGACCGATACCTCCATCAATGGGCTTGTTATCTAATCTCACCTCCCTGCATTTGCATGAGAATAAGCTTTATGGACAGATTCCTTTCTCGTTGAAAAATTGTCACTCTCTGTTGATCTTTAATGTTCGGGATAACAATTTATCAGGAAACATACCACATTGGATATCACTCAGTGCAAAGGCTCTGCAATTAAGCTCTAATAATTTTACTGGTAATATCCCTCCACAAATATGTCAAATGTCTTCCCTCATTATTTTGGATTTTGCCCATAACACCATCTCAGGACATTTACCCAGTTGTTTGCATAATGTCACAGCCTTAGTTTTCAACAATGCTTCACGATACAAGTTTTCTTATTCCTTCCCTTCATTTCATAACCGTTACTTGATCATCGATGATGGTCTTGAGTTAGTTACAAAAGGTCAAGTATCAGAATATGGGAAAAACCTACACTTTGTCACCTTAATTGATATGTCAAGTAACAATTTGACTGGAACAATACCTTCTCAAATGTTTAGCCTCACTGGATTGTTCTCCTTGAATTTGTCCCACAATAGTTTAACAGGGAAAATACCAAATGAAATTGGCTACATGAAACACTTGGAGTCCTTGGATTTTTCAGTAAACAATTTTTGGGGTGAAATTCCTCAAGACTTGTCCAGTTTATCCTTTCTGAGTTACTTAAACCTGTCCTTCAACAATTTGACAGGCCAAATACCATCAGGCACACAAATGCAGGGGTTCAATGTACTCAGCTATATAGGCAATCGTGATCTTTGTGGACCTCCACTTACAAAAAATTGCTCGCAAGATGTGAAGCCTAAAGACACAGAGCCAACACATGAAGATGAACATAAATCCGAATTTGTGTCATGGTTTTTTATTGGAATAGAATCTGGATTTGTGACAAGCTTCTTAGGAGTTTGTTGTACTATTTTCTTCAACCGAAAATGGAGACACGCATACTTCAAATTTCTTTACAACATGAGAGACCGACTTTATGTCGCGATAGTCATCAAAACAAATGTCTTCCGTCTCCGTTGA 2637 0.3823 MNTSLSLYATLFAWLLYAIMLNKVTCSFNIRCHQKDKQALFNFKQGIIDPSHALSSWFTQQDCCQWRGVTCDNITSRVTHLSLPCSTTLPTYTDKTNKSLCLTGSIYLSSMDFEFLSYLDLGNNDFLAFQFDSVTHNYQNQSVAVHPRRFVNSSALRYLDLSGNENLAMNSLQWLSRMSSLEHLNLGGIDLHKETNWLQVVTMPSSLSELYLMGCQLENLSPSLKYANFSALRYLALSENEFHSELPKWLFNISHGISRIEFRSCSLRGQLPKELLNLRDLEALVLEDNNFNGPIPDWLGELEHLQYLILGSNLFSGSMPTKLGNLSSLISLTVGGNQLAGVVSERNFAKMSKLKEMDIYLSPPLIFDFDPHWVPPFQLAQILLGFAGPNFPMWLYTQRSLESLAIVESSFEAQGKFWNFVSKVPEVQIEENLIDGNLSNVVLNSSYIDLSSNGLKGGLPRLSSNVAVVLLSDNLLSGDLTPLLCDHKMLSAESNLLYLDISLNHLSGGLTSCWRNKKSLVHVNLGGNNLTGPIPPSMGLLSNLTSLHLHENKLYGQIPFSLKNCHSLLIFNVRDNNLSGNIPHWISLSAKALQLSSNNFTGNIPPQICQMSSLIILDFAHNTISGHLPSCLHNVTALVFNNASRYKFSYSFPSFHNRYLIIDDGLELVTKGQVSEYGKNLHFVTLIDMSSNNLTGTIPSQMFSLTGLFSLNLSHNSLTGKIPNEIGYMKHLESLDFSVNNFWGEIPQDLSSLSFLSYLNLSFNNLTGQIPSGTQMQGFNVLSYIGNRDLCGPPLTKNCSQDVKPKDTEPTHEDEHKSEFVSWFFIGIESGFVTSFLGVCCTIFFNRKWRHAYFKFLYNMRDRLYVAIVIKTNVFRLR 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02275 878 FunFam Tyrosine-sulfated glycopeptide receptor 1 579 804 - -
Phco6g02275 878 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 254 343 - -
Phco6g02275 878 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 487 578 - -
Phco6g02275 878 Pfam Leucine rich repeat 687 741 IPR001611 GO:0005515
Phco6g02275 878 SUPERFAMILY L domain-like 32 359 - -
Phco6g02275 878 Gene3D Ribonuclease Inhibitor 32 363 IPR032675 -
Phco6g02275 878 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Phco6g02275 878 SUPERFAMILY L domain-like 449 796 - -
Phco6g02275 878 Gene3D Ribonuclease Inhibitor 376 802 IPR032675 -
Phco6g02275 878 PANTHER LRR RECEPTOR-LIKE KINASE 32 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02275 Phco-Chr6 43996329 43998965 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02275 6 43996329 43998965 Phco6g02275 6 43996329 43998965 ECH