Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02274 ATGAGTGCCTTTTCCTCTCAACATGCAGTCATTTTTGCATGGTTACTGTGCACACTCATGCTAAATACTGGGACATGCAATAACTTCAGTATTGGTTGTAGCCAGAAAGACAAGTTGGGTCTCTTAAACTTCAAGCAAAGAGTAATAGATCTATCAGCTGTGCTCTCTTCGTGGAACCCTGATCAAGATTGTTGTCAGTGGAGAGGAGTTAACTGTGATCACATCACTGGTCGAGTCACTAGGCTCAGTCTCCCATGTTCTACAACACTTGCAACTTACATTGACAAACAAGATAAATCACACTGTCTCTCAGGTTCTATTCACCTATCCTTACTGTTGGTGGAATTGGAATTTCTAAATGACTTGAATTTGAGCAATAATGACTTTTTAGCTCTCCAATTTGATTCTGTACATCAGAATTGCCATAACCTGTCTGTAGTTTCTCATTTTCATCGGTGTGTCAACTCTTCTTCTCTTGGTTATCTTGATCTATCATTTAACGACAATCTTGCCATCAATAGTCTGCAGTGGCTTTCTCGCATTTATTCCTTGAAATATCTCGACCTCGGTGGAATTGATCTTCACAAGGAAACTAACTGGCTTCAACCACTCACTATGCTTCCATCACTTTCAGTACTCGTGATGTCTGATTGTCAACTTAAGGACCTTAGTCCATCTCTTCTATATGCCAATTTTACTGCACTCAATGCTCTTGATCTTTCTAAAAATGAATTTAGCTCAGAGTTGCCTAAATGGTTATTCAATCTTAGTTGTGGTATCTGTTATTTAGAATTTGGGATGAATTCTTTAAGAGGCCAATTACCTGAGGCGTTGTTAAATCTTCGACAGCTAAAATACTTGAACTTCGAAGATAATGACCTGGATGGACCCATTCCTCTTTGGTTTGGCAAATTCCAATATCTAAAATATCTTATTATTGGAGCGAACATGTTTTCTGGATCCATTCCCCCAAATTTGGGAAATCTATCATCCTTAATTGCCTTGAGTGTTAGCTCAAACCAATTCACAGGAGTTGTGTCTGAGAGAAATTTTGCCAAATTGTCAAAATTAAAGAGATTAATTATATATTCGTCACCACCATTAATCTTTGATTGTGAGTCCCAATGGGTTCCACCTTTCCAACTTGAACGATTGGTTCTCGGATTTGCAGGTCCTAACCTTCCAGAGTGGTTGTATACACAAAGAAATCTTAAACGTTTATCTATTTTTTATTCATCATTTGTGGCCAAAAGCAAATTTTGGAATTTTGTATCAAGAGTGAGTGAACTCGATTTAGAAGGTAATTTGATAGTTGGGAACCTGTCAAATAATGTGTTGTTGAACTCTTCATTCATCAGTCTAACATCAAATGATCTAAAAGGTTCCCTGCCTCGATTATCATCAAATGTGGTGATTTTCGATGTATCGAACAACTCATTATCTGGAACTATTTTTCCTCTCTTGTGTGATCATAAGATGCTGAATGGAAAAGGCAGTTTGATCTACTTAGACATCTCTCGTAATCATCTATCCGGAGAGCTTACAAATTGTTGGAAGAATTGGAAATCATTGATTCATGTTAATTTGGGAAGCAATAATCTGACTGGCAAGATACCATCGTCAATGGGCTCCTTACTTAGTCTTGCCTCACTACATTTGCATGAGAATAATCTCTATGGCACGATTCCTACCTCGCTACAAAATTGTCACTCTCTGTTGATCTTTAATGTGCGTGAAAATAACTTATCAGGAACTATACCACACTGGATACCACATGATGCTAGGGCTCTCCAACTAAGGTCCAATAATTTTAGTAGTAACATCCCAACACAGATTTGTCAAATATCTTCCCTCATTATTTTGGATATTGCTGACAACATAATCTCAGGAGAGATACCAACCTGCCTGCATAATATAACATCTTTAGTTTTCAACAATGCTACAAAGAGCAGCCTTTCTTTTTCCTTTCATTATTCTAGTTCTCTTATCTACTTCCACGACGACAGTCTTGAGCTGGTTACAAAAGGTCGAGTATCAGAATACGATACAAACTTGCACTTTATGACCTTAATTGACATGTCAAGTAACAATTTGTTCGGAACAGTACCTCCCCAAATGTTCAGCCTCGTTGGATTGTGCTCTTTGAACTTGTCTCACAATAAATTAAGGGGGAAAATACCATATGAGATTGGCAACATGAGAAGCTTGGAGTCCCTTGATCTTTCAGCAAACCAATTTTGGGGTGAAATTCCTCAAGGCTTGGCCAATTTGTCCTTTCTCGGAGTCTTAAACCTATCATTTAACAATTTCAGTGGCAAAATTCCTTCTGGGACACAACTTCAGGGGTTTGATGCAGTGAGCTATATTGGCAATCCTGATCTTTGTGGACCTCCACTTCCCAAAATCTGCTGGCAGGATGCTGAACATAAAGACTCAAAGCCAATAGATGAAGATGAGGATAAAGATGAATTTTTGTCATGGTTTTATATTGGACTAAAGTCTGGATTCGTCACTGGCTTTTTGGGAGTCTTTTGTGCCCTTTTCTTAAATAGAAAATGGAGGCAAGCTTACTTCACGTTTCTTTATGATATGAGAGATCGACTTTATGTCATGGTGCTCATCAAAATGAATTCCTCTCGTTGA 2643 0.3814 MSAFSSQHAVIFAWLLCTLMLNTGTCNNFSIGCSQKDKLGLLNFKQRVIDLSAVLSSWNPDQDCCQWRGVNCDHITGRVTRLSLPCSTTLATYIDKQDKSHCLSGSIHLSLLLVELEFLNDLNLSNNDFLALQFDSVHQNCHNLSVVSHFHRCVNSSSLGYLDLSFNDNLAINSLQWLSRIYSLKYLDLGGIDLHKETNWLQPLTMLPSLSVLVMSDCQLKDLSPSLLYANFTALNALDLSKNEFSSELPKWLFNLSCGICYLEFGMNSLRGQLPEALLNLRQLKYLNFEDNDLDGPIPLWFGKFQYLKYLIIGANMFSGSIPPNLGNLSSLIALSVSSNQFTGVVSERNFAKLSKLKRLIIYSSPPLIFDCESQWVPPFQLERLVLGFAGPNLPEWLYTQRNLKRLSIFYSSFVAKSKFWNFVSRVSELDLEGNLIVGNLSNNVLLNSSFISLTSNDLKGSLPRLSSNVVIFDVSNNSLSGTIFPLLCDHKMLNGKGSLIYLDISRNHLSGELTNCWKNWKSLIHVNLGSNNLTGKIPSSMGSLLSLASLHLHENNLYGTIPTSLQNCHSLLIFNVRENNLSGTIPHWIPHDARALQLRSNNFSSNIPTQICQISSLIILDIADNIISGEIPTCLHNITSLVFNNATKSSLSFSFHYSSSLIYFHDDSLELVTKGRVSEYDTNLHFMTLIDMSSNNLFGTVPPQMFSLVGLCSLNLSHNKLRGKIPYEIGNMRSLESLDLSANQFWGEIPQGLANLSFLGVLNLSFNNFSGKIPSGTQLQGFDAVSYIGNPDLCGPPLPKICWQDAEHKDSKPIDEDEDKDEFLSWFYIGLKSGFVTGFLGVFCALFLNRKWRQAYFTFLYDMRDRLYVMVLIKMNSSR 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02274 880 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 491 586 - -
Phco6g02274 880 Gene3D Ribonuclease Inhibitor 33 349 IPR032675 -
Phco6g02274 880 Pfam Leucine rich repeat 693 746 IPR001611 GO:0005515
Phco6g02274 880 SMART LRR_typ_2 685 709 IPR003591 -
Phco6g02274 880 SMART LRR_typ_2 232 256 IPR003591 -
Phco6g02274 880 SMART LRR_typ_2 733 757 IPR003591 -
Phco6g02274 880 SMART LRR_typ_2 207 230 IPR003591 -
Phco6g02274 880 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 258 346 - -
Phco6g02274 880 SUPERFAMILY L domain-like 456 800 - -
Phco6g02274 880 PANTHER LRR RECEPTOR-LIKE KINASE 207 344 - -
Phco6g02274 880 SUPERFAMILY RNI-like 121 444 - -
Phco6g02274 880 Gene3D Ribonuclease Inhibitor 350 806 IPR032675 -
Phco6g02274 880 FunFam Tyrosine-sulfated glycopeptide receptor 1 590 808 - -
Phco6g02274 880 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02274 Phco-Chr6 43987643 43990285 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02274 6 43987643 43990285 Phco6g02274 6 43987643 43990285 ECH