Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02266 ATGAGGATGAGGGTTTCGGTTGTTTTAAGTGTTGTGTTGTTGATCCAGTTTTGGCCTGGTGAAGCTGAGACATTTTCGGTGGATGGAAGGGTTTTGATTTTGGACGAGTCCAACTTCGATTCCGCCATAGCCTCCTTCGATAACATATTGGTTGATTTTTACGCTCCCTGGTGTGGTCACTGCAAGCGTCTTGCTCCCGAGTTAGATGCAGCTGCGCCTGTACTAGCAACCTTGAACAAACCCATAGTCATTGCAAAAGTAGATGCAGATAAGCATACCCGCCTTGGAAAAAAATATGATGTCAGTGCATATCCAACCATTTTGCTGTTTAATCATGGCATCCCCACAGAATACCGTGGACCAAGGAAGGCAGATTTACTCGTTAGATATCTGAAGAAGTTTGCTGCTTCTGATGTTTCCATTCTGGATTCAGATTCTGCTGTGAATACATTCGTTGCAGAAGCTGGCACTTTTTTCCCGATTTTTATAGGTTTTGGTTTGAACAGCACGCTAATAGAAAAGTTTGGCATAAAGTACAAGAAACAGGCATGGTTTTCTGTGGCAAAGGATTTTTCAGAGGATCTCATGGTATTGTATGACTTTGATAAGATTCCTGCATTGGTTTCCCTGAATCCTCAGTACAGTGAGCGGAACACATTCTATGGACCCTTTGAAGATGAATTTTTGGAAGATTTTGTTAGACAAAACCTGATTCCGTTGGTTGTGCCTGTATCCTACGAAACACTTAAGTTGGTGAAAGCAGATGGTAGGAAAATAGTTTTGACAATTGTTGAGGATGAAGATGAAGAAAGATCAAGAGAACTGACTAAGTTATTGAAGGCTGCTGCATCTGCTAATCGTGACTTAGTATTTAGTTATGTTGGAGTCAAACAGATGGAAGAATTTGCTGAAAATTTTGATATTAGTACCAAACTACCAAAAATGGTCGTTTGGGATAAAGGTGAAGATTACCTTTCGGTTGTTGATTCAGAAAGCATTGATGGGGAGGATCAGGCAACTGAAATCTCTAAATTTCTGGAAGGGTATAGGGAAGGAAGAACCATAAATAAAACATTTAGTGGACCTTCACTAATGCAATTCATCCATCGGTCTTTTGACATTAGAATGGTATACATCGTTGTTTTAGTTGTGGCAGTACTGATACTTATTCAGAGCTTCAGTAAAGATGATGAATACCATCCTGTACCAAATCAAGTTCAAGAAGATGATCCAAGCAGTTCAGTTTCAGAAGCTGAAAGCAAAGAGTATAAACCAGGTGACAAGGAAGATTAA 1293 0.3991 MRMRVSVVLSVVLLIQFWPGEAETFSVDGRVLILDESNFDSAIASFDNILVDFYAPWCGHCKRLAPELDAAAPVLATLNKPIVIAKVDADKHTRLGKKYDVSAYPTILLFNHGIPTEYRGPRKADLLVRYLKKFAASDVSILDSDSAVNTFVAEAGTFFPIFIGFGLNSTLIEKFGIKYKKQAWFSVAKDFSEDLMVLYDFDKIPALVSLNPQYSERNTFYGPFEDEFLEDFVRQNLIPLVVPVSYETLKLVKADGRKIVLTIVEDEDEERSRELTKLLKAAASANRDLVFSYVGVKQMEEFAENFDISTKLPKMVVWDKGEDYLSVVDSESIDGEDQATEISKFLEGYREGRTINKTFSGPSLMQFIHRSFDIRMVYIVVLVVAVLILIQSFSKDDEYHPVPNQVQEDDPSSSVSEAESKEYKPGDKED 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02266 430 PANTHER PROTEIN DISULFIDE ISOMERASE 5 354 - -
Phco6g02266 430 Gene3D Glutaredoxin 20 144 - -
Phco6g02266 430 Pfam Thioredoxin-like domain 191 334 - -
Phco6g02266 430 PRINTS Thioredoxin family signature 100 111 - -
Phco6g02266 430 PRINTS Thioredoxin family signature 57 66 - -
Phco6g02266 430 PRINTS Thioredoxin family signature 49 57 - -
Phco6g02266 430 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Phco6g02266 430 FunFam Protein disulfide-isomerase 5-2 20 135 - -
Phco6g02266 430 SUPERFAMILY Thioredoxin-like 236 355 IPR036249 -
Phco6g02266 430 Gene3D Glutaredoxin 227 362 - -
Phco6g02266 430 SUPERFAMILY Thioredoxin-like 24 134 IPR036249 -
Phco6g02266 430 MobiDBLite consensus disorder prediction 398 430 - -
Phco6g02266 430 CDD PDI_a_family 32 131 - -
Phco6g02266 430 MobiDBLite consensus disorder prediction 414 430 - -
Phco6g02266 430 Pfam Thioredoxin 31 133 IPR013766 -
Phco6g02266 430 ProSiteProfiles Thioredoxin domain profile. 12 136 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02266 Phco-Chr6 43865348 43870063 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02266 6 43865348 43870063 Phco6g02266 6 43865348 43870063 ECH