Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02253 ATGGGTGACAGAAGAAAGAAGAAGCATCGTCTACAGGACTCATCTACGTCCTCATCCTCTCCCTCGTCGTCGTCGGACTCTGACCGCTCTTCACGGCGGCGGCGGCGGCGACGCGAGAAGGAGCGGCGCAGAAGGAGCGAGGAGAAGGAGGAGCGAAGGAGAAAGAGGAGAGACAGAGAGAGGAAAAAGAGGAAGAGGCTCCATGATTCCGATGACTCCTCCAACTCTTCGGAGGATGAAGACAAACAACCTAGGGTTCTGCCTGAAACTGTGATAACAGATATGATGATAGAGTTCCCCAACGTCGGCAACGATTTGAAGCAGCTTTTGCAAATGGTTGATGATGGACAAGCTGTTGACATAAAGGGTATATCAGAACGATCTTTGGCGAAGCATTTGAAGAAGCTGTTTCTTTCATTAAACCTTAAGGAGAACGGAGATGGGGTTTTCTTGCTGCCTTCTAAAGCTCGCCCTACTTTGGATGTTCTTGGCCCTCTCATTCACTCCTACACAAATCCCATAATAAATGAGCAAGCTGAGGCTTCTGCACCGGTGCCTGAATCCGGTTCAGTTCCAGTGGATGTTGGAAAGGAACAGATGGTGGATGACCATGTGCTCGCATCTCCAGATGATCATTCTGTAGGTCCTAGGAAAAGGATGATTGGCCCTGCAATGCCATCAGCTGAATTACTGGCCGCTGCTGCCAAATTAACAGAGGCGCAGACTGAGCTCAGAGAGGCCGAATTGGATGATGACAGTGAACTATTTATTGGACCTGCACCACCAGCTATGGTTTCTGAAGCAGAATCAGCTAATGATGCAGAACGTTTTGAAGAGGTTACCAGAATAATGGAAGTTGAGGCTGATAGCCCATATGATGTTCTAGGAGTCAATCACAATATGTCCGATGGAAATGTTAAGAAAAGGTACTGGAAGATATCACTATTGGTTCATCCAGATAAATGCTCTCATCCACAAGCCCACCAGGCATTCATTAAGTTAAATAAAGCTTTCAAAGAGTTACAAGATCCAGAAAAGCGGAAAGCAATGGATGAGAAAATCAAACTCAAGCAAGAACAAGAGGAATTTAAGGCTCAACTTAAAACCATGCGTGAGGCTGCACTATGGAGAAGATCTCAAGGTATTTCCATGGAGGGTGATGAAGAACTTCTGGCGCAGACAGAGGTTAAAGTGGAGCCACAAAGGGATGAGTGGATGACAACACTGCCTCCAGAAAGGAAACCTGGTGGTATGACTATGCACTCAACCAAATTTAGTCGGGGCCCAAAGGAAGGTAGAGGTGATACTAGTGTTTGGACAGACACCCCTTTGGATAGGGCCCAGAAAGCAAAGATGAATTATTTGGAGGCATACAATGAAGCTACTGCACTAGCTTCAAATGATGATGATAAGAAAAGGGCCAGTGAGGATGCAGACTTGGTGGACAAATACAACAAAGCAAAACGGTCAAAAACATTGGTGCAGAAACATCAAGAAGTGGTTGCTAACAAATCCAAGAAAAAGTCCAAGCAAGAGAAGCAACAGCCAGGGAAGGAAGAGTGGGTGGGTGAACATCCATGGAAGCCATGGGACCGTGAAAAGGATCTGACAGCTGGAAGGAAAACTGTAAATTTTGATTCAGAAAGCATGACTAAGGATTTATCTTCAAGGTTTTCTTCTGGAAACTTTCAGAGGAACTTCCTTTGA 1707 0.4575 MGDRRKKKHRLQDSSTSSSSPSSSSDSDRSSRRRRRRREKERRRRSEEKEERRRKRRDRERKKRKRLHDSDDSSNSSEDEDKQPRVLPETVITDMMIEFPNVGNDLKQLLQMVDDGQAVDIKGISERSLAKHLKKLFLSLNLKENGDGVFLLPSKARPTLDVLGPLIHSYTNPIINEQAEASAPVPESGSVPVDVGKEQMVDDHVLASPDDHSVGPRKRMIGPAMPSAELLAAAAKLTEAQTELREAELDDDSELFIGPAPPAMVSEAESANDAERFEEVTRIMEVEADSPYDVLGVNHNMSDGNVKKRYWKISLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDEKIKLKQEQEEFKAQLKTMREAALWRRSQGISMEGDEELLAQTEVKVEPQRDEWMTTLPPERKPGGMTMHSTKFSRGPKEGRGDTSVWTDTPLDRAQKAKMNYLEAYNEATALASNDDDKKRASEDADLVDKYNKAKRSKTLVQKHQEVVANKSKKKSKQEKQQPGKEEWVGEHPWKPWDREKDLTAGRKTVNFDSESMTKDLSSRFSSGNFQRNFL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02253 568 Coils Coil 346 373 - -
Phco6g02253 568 MobiDBLite consensus disorder prediction 64 87 - -
Phco6g02253 568 Pfam DnaJ domain 291 351 IPR001623 -
Phco6g02253 568 Pfam Protein of unknown function (DUF3752) 410 559 IPR022226 -
Phco6g02253 568 MobiDBLite consensus disorder prediction 488 541 - -
Phco6g02253 568 Coils Coil 230 250 - -
Phco6g02253 568 MobiDBLite consensus disorder prediction 488 568 - -
Phco6g02253 568 PRINTS DnaJ domain signature 310 325 IPR001623 -
Phco6g02253 568 PRINTS DnaJ domain signature 326 346 IPR001623 -
Phco6g02253 568 PRINTS DnaJ domain signature 292 310 IPR001623 -
Phco6g02253 568 SUPERFAMILY Chaperone J-domain 265 348 IPR036869 -
Phco6g02253 568 MobiDBLite consensus disorder prediction 407 440 - -
Phco6g02253 568 ProSiteProfiles IBB domain profile. 13 74 IPR002652 GO:0006606|GO:0061608
Phco6g02253 568 Coils Coil 38 65 - -
Phco6g02253 568 Gene3D DnaJ domain 273 375 IPR036869 -
Phco6g02253 568 MobiDBLite consensus disorder prediction 542 568 - -
Phco6g02253 568 Coils Coil 444 464 - -
Phco6g02253 568 SMART dnaj_3 289 346 IPR001623 -
Phco6g02253 568 MobiDBLite consensus disorder prediction 1 87 - -
Phco6g02253 568 CDD DnaJ 291 343 IPR001623 -
Phco6g02253 568 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 7 568 - -
Phco6g02253 568 ProSiteProfiles dnaJ domain profile. 290 354 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02253 Phco-Chr6 43685903 43695016 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02253 6 43685903 43695016 Phco6g02253 6 43685903 43695016 ECH