Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02250 ATGGCTCAGCAGAGGCAATCGGGAATGGAGAGGCTTGGGGTGAGAGTGGGGCCCCACGATCTGCACCACACCAACGGCGCAGGCGATCACGTCGCTGTTGGGATTCGCGGTGGCGCCGCTCACAAGCACCAGCGGTCCCGGCGATCGGCGCGATCCGAAAGGGGCACGCAACTGTCGGTGGTGGCAATTCTTGTTTTCCTCTTCCTCGTACTTGTCGTTACTGTGCTCGTCTTCTCTTACATTTCTAGAGACGAAATAAGTAACAATGGCGATGATAGTGTTGATTTAAAGAGTGAATCTGATTTTCTTACAAATGTACCTCGGATACAGAAGAAGAAAGTCCTTGACTTTGGGCATGGCTCTGGAGGACATGGCCGAGATTCAAGATATTGGGATAAGGATGATAGGAGAAGGGATGGTGATTATGATGAGGATATGATGGAGCAGACAAGTAAGGATCCTGGAGATGAAATTGCTGAAGATGATGATGTTGTAAAGAAGGACCAAGATACCAAGTCTTCTCATGATGGCTTAAAGCGGAGAGGCGATGGCTTATATAATGAAGCTGGACGTCATGAGTTGAAAAGATATGAAGCAGAATATGAGGCTTCTTTGAAGAATCTGAGACACTCCACTGAAGATGATGGGAAACTGTTGCATGAGACTGACCTTGAAAAGAAAAATGCGTCGGATGACATTGATGATGAATATGATGATTTTTTTGATTTTAATGATGCTCAATTGGAAAACACTAGCTATAGCAAAAATATGAGAGGCGAACATTCTAATGCAAATGTGTTAGGCTTGGACAATGAAGTTCAGAAACAGAAAGAATCTAATGATTCTCTTGCTGAGGAAAACAATGATGTTACTTCTAAGGATATTGAAGGGACGTCTTCCTTGAATAAAAAAATCCTTCTTGAGGGAAAAACAAATTCTAAACATGCAAGTAACTTAAATGGACAATCAACTAGAAAATCGCATCCTGAAACAAAGAAGAAAGTCAGGCGACGTAAATTTTCAGGATCCTGTGAGATGAAATTGTTAAACTCAACTTCACAGCTTGTAGAACCCCTAGAAAGTCGAAAATTTGCAAGATTTAACTTACATTACACAGAGATGGAAGAGAAGCCCCTGGGAGAAGAACAATGGGTTCCCAGATTTGCAGGCCATCAGAGCTTAGAAGAGAGAGAAAGTTCATTTTTGGCACGTGATCAGAAAATAAAATGTGGTTTTGTTAAAGGTCCTGAAGGGTCTCAAAGTACTGGATTTGACTTGACAGAAGACGATGCAAGTTACATCAGCAGGTGCCACATTGCTGTGATTTCATGCATATTTGGAAATTCTGATCGTTTGAGGATCCCGGCCACCAAAACGGTCACTCGAGTGTCGAGGAAGAATGTCTGCTTTGTTATGTTTACTGATGAAATTACAATACGGACACTCTCTTCTGAAGGGCATGTGCCTGATAGAATGGGTTTCATTGGCTTTTGGAAGTTGGTGGTAGTGAAGAATCTACCATACGATGATATGCGAAGAGTGGGGAAAATACCTAAGTTGTTGCCACATCGACTTTTTCCTTTTGCAAGGTATTCAATTTGGTTGGATAGCAAATTACGGCTGCAGCTTGATCCTTTACTTATCTTGGAGTACTTTTTGTGGCGAAAGGGTTATGAATTTGCAATATCCAATCACTATGATCGGCATTGTGTGTGGGAAGAAGTAGCACAAAACAAGAAATTGAACAAGTATAATCACACAGTTATAGATCAACAATTTTCATTTTACCGGGCCGATGGACTGGAAAGATTTGATGCATCGGATCCAAACAAGCTTCTTCCAAGCAATGTACCTGAAGGTTCTTTTATTATCAGAGCGCACACTCCAATGTCGAATTTATTTTCTTGTCTTTGGTTCAATGAAGTTGATCGGTTCACTCCTCGTGATCAGCTGAGTTTTGCATATACATATCAGAAGCTGAGAAGGATGAATGCGGACAAACCTTTTCATCTGAATATGTTCAAGGACTGTGAAAGGAGACACATAGCCAAGTTGTTCCGTCATAGATTGGATGAGAAGAAGATAAACCATTAA 2094 0.416 MAQQRQSGMERLGVRVGPHDLHHTNGAGDHVAVGIRGGAAHKHQRSRRSARSERGTQLSVVAILVFLFLVLVVTVLVFSYISRDEISNNGDDSVDLKSESDFLTNVPRIQKKKVLDFGHGSGGHGRDSRYWDKDDRRRDGDYDEDMMEQTSKDPGDEIAEDDDVVKKDQDTKSSHDGLKRRGDGLYNEAGRHELKRYEAEYEASLKNLRHSTEDDGKLLHETDLEKKNASDDIDDEYDDFFDFNDAQLENTSYSKNMRGEHSNANVLGLDNEVQKQKESNDSLAEENNDVTSKDIEGTSSLNKKILLEGKTNSKHASNLNGQSTRKSHPETKKKVRRRKFSGSCEMKLLNSTSQLVEPLESRKFARFNLHYTEMEEKPLGEEQWVPRFAGHQSLEERESSFLARDQKIKCGFVKGPEGSQSTGFDLTEDDASYISRCHIAVISCIFGNSDRLRIPATKTVTRVSRKNVCFVMFTDEITIRTLSSEGHVPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLPHRLFPFARYSIWLDSKLRLQLDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVAQNKKLNKYNHTVIDQQFSFYRADGLERFDASDPNKLLPSNVPEGSFIIRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAYTYQKLRRMNADKPFHLNMFKDCERRHIAKLFRHRLDEKKINH 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02250 697 Coils Coil 187 214 - -
Phco6g02250 697 MobiDBLite consensus disorder prediction 308 325 - -
Phco6g02250 697 MobiDBLite consensus disorder prediction 308 337 - -
Phco6g02250 697 MobiDBLite consensus disorder prediction 114 184 - -
Phco6g02250 697 PANTHER ALKALINE CERAMIDASE-RELATED 45 694 IPR006852 -
Phco6g02250 697 MobiDBLite consensus disorder prediction 274 292 - -
Phco6g02250 697 Coils Coil 266 293 - -
Phco6g02250 697 MobiDBLite consensus disorder prediction 274 296 - -
Phco6g02250 697 Pfam Protein of unknown function (DUF616) 369 688 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02250 Phco-Chr6 43662437 43669209 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02250 6 43662437 43669209 Phco6g02250 6 43662437 43669209 ECH