Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02244 ATGGCTGACATTGCCATGGCACAAATGAGTAACATTAACAATAACCCAGAACAAGAAACGCATGCAAAGTTCCCAGTTTTAACGGTGCTCAAGAACAACGCCGTTCTCAAGAATATCCTCCTCGTACACGACGGCAACAACGAAGATCAGACGGTCCTGATTGGGCGACACCCTGACTGCAACATCGTCCTCATGCACCCCAGCGTGAGCCGTTTCCACCTCAGGATTTGCTCCAACCCTTCTTCCCTCACTCTTTCTCTCGTTGATTTGGCTTCTGTGCATGGTACGTGGGTGCGTGGGATGAAGCTGGAGCCCGGGGTTAGGGTGGAATTGAAGGAAGGTGACACCTTCACTGTAGGGGTTTCTACTAGGCTTTATCGTCTCAGCTGGGTCCCTCTTACCCAATTGAATGCCTTTTTGCCCCATCAACAACAAAAAGAAGATGAACAAGAAGAGATAATCAAGGATGAGAATTGGGAATATACTGTGGAACAAGAGATTCCGGAGGCTGAAGACATGGTTTCTCTTTGTTGCGATGAAGAGAGCAAGAGCCATTCTGAAGATAAGGTATTGGGAGTTATCAATGGAACTGAAACATCGTGTTTTCCTACACATTCTGGTGGTGAAAATATACATTGTGACTGTCAAAATAGTGTTTTATCACCCCCACATGTACAATCACCCCCTTATGCAAAATCAGTTGATGAACTCGATTACACTGAGAAAATTGAAGCTTGTCCGAAAGTGGAGATGCCTGGAGAAACTAATTTGCTTTGCACATTGAGAGAGTATTTCACACAGAACTTATGTCTGCCTGTTGTGGAAGCGGTCCAGGGGACCAAAATGCAGCAATTTCAAGCCCCACATGGTACTTTCACAAAACAACAACCTTCTTTGAAAATGCTTTGGTCCAGCTTGTCTACAGATATTGATTCTGCGACTTTTGATGAAAGGGATGGTGTTGCAGTGGCTGTAATACCTACAGAATCTGATTCTGGATGCACACAAGGAGATACTGACAAGGTTGAAGATATTTTAACCACTGGACCAAGAATTTTCAATTCTGAGAAGACTTGTTTGATAGTTGAGAAAGATCTTCCAGATTCTGAATTTCATCAAATGGAAGTTGTTGAAGAATTTTCTGTGGATTCAGTACCGGAAGGAGAAAAACAAGGTGAAATTCACTGGTCCAGCTTGCCTACAAATATCGGTCCCTCCTCTTTTGATGTAAAAGATGTTGCTGCAGTGGCTGCAATACTTACAGAATCTGAGTTTGGATTCACATATGGGGATAATGACAAGGTTGGAAATATTCTCACTTCTGGACTAAGAACTTCCAATTCTGCGAACACGTGTTTGATAGTTGACAAAGATATTCCTGATTCTGTATTTCATCAAATGGAAGTTGTTGAAGAAGTTTCTATGGATTCAATACGTGATGAAGAAAAACAAGATGAATGCAAGGAAGAGTACATGTCAAAGTTGCAGGATCAGAATGGAAAATCTTTCCTTGAGGAAGGGTACTCTCGGGATGAAATAGTTGAAGATAATGGAAACAACTGTATTAAAAGCATATATCCTGCATCTTTTAATGAAAAGAGCTTAGCTGTAGTAACTCTAATACCCACAGAATCTGAGTTTGGATGCACACTAGGAGATAATGAAATGATTGAAGATATTTTAGAAACGGAATCACGAACTATCAATCCTGAGAACACATCCTTGCTAGATGAGGAAGTTATTCCTGTTTCCAAATTTCAACCAATCAATATTGTTGAAGATGTTGTTGTGGATTCAATATCTGATGGAGGAAAAGAAGATAAGTGTGGCAAGGAATTGGAGTCAAAGTTGCAGGCTTCCCTGGATGCTAAATCCTGTCAGGAACCTGGTAATTCAGTGGATGAAATAGCTGAAGATAATGGAAAAATTTGTACAAAGAGCATCTCCTCCACGTCATTCCATGTAGAATCTCCAAGTTCTTCATTGCTTCAGGAAGTTGTCTTGAACATTGCAGCTGAGAACCAGACCCCTCAATCTCTCACCTCTCTGACAGGATGCTCTGGAGGGGAGTTCCTTGAAAAACATGTAGAATCAACAGAGAAAAGTTCAACCTTTGGCAGTATTTGGTCAAGAAGGTGTAAGGGTTTTAGTGCTCCCCATATTGGAGCCAGAAAGCGTAGATTTATGAGCACATCTAAGGTTGGCACTGAAGTTAAAAAGAGTAATGTAAATGATGCCATAAATAAATCAATGCCAAAGGATCTTTCCTCTGTTTTTGATGTTGAAGAAAAAATATTCACTTCAAATAAGGAAAACCTAAGCTTAAACACCTATCATTTGCAGCTCATGAGGAAGAAAGATAAGCTAGAAGAAATTAAACTTCCTACGTCACAAAGGTCACCCAATTTGAGCTGTTTTAGTCCCAGCATTCATTCAGCCAAAAGCACAAGCGATGTTTCAAATAAAGTGAACTTGACTACAAAAGTAGCTGAAGAATGGAAGTCACAAAGAAAGCCTCTTAAATGTCTGATTAACTTGGTTCATGAGCAAGATAAGATGGAATTAAAAAAGAAAAGAGTGGAAAGGGTACCCTTCCGATCACTAATGAACTCTGGAGGCAATCATAATTCAGTTGTTATTTCTGCTGCAGAAAGTACTGATGATGCCGGTATTTGTGGGAAGATCTCAAACAAGTGCACTAAACCTTCACAACATAGTAGTAGAGAACAAAGGAGGATCTGGGAGATGGTTGTAGACACTGCTTCTCTCGTGAACAATGAGTCAAGAAAAGCTTTGCAGCTTCTACAAGGTCTCAAGGGGACTCGTTTAATGATTCCAAGATCGGGCTGTATGAAGCAACAATTTAGACTTTTCAGAACAACTTCAGAGGCTTCTTTGGCATTAGAATGGATTAAAGAATGCATTGAGAAAACAAGGTGGTGGATTCATATCCAAAGCTCAATGGAGGAGTGCAGTCCAACCCTTTCTGCTTCTCCGCAGACTCAGTTTGTTGAAGAGAGTTGGGCATTTCCTGGTTTCTCGATCTCAAATAAATGTGCTTCACCTGCTGTTGAAGATCACATCCTTGACTGTGCTCTTCAATATAGAAGAAAGGAGAATGTTGGACAACTTGTCCTACTTAGTCATGATGTTACATTGAAAATAAAATCCATGGCAAAGGGGTTGCTGTGCGAGACAGTGCAACAATTTCGCCAGAGTTTAGCAAACCCCTTCTCTGAGAGGTTCATGTGGCCCAAGAGCTCTCCTCGAGGACTGACTTGGTCTTGCCAAGATGATTTGGTTTTAAGGGAGAAGTATTGTGGATTGCCATCAAAGGCTGGTTTGAAGCTCATCACAGAACAGCTTTAG 3369 0.4105 MADIAMAQMSNINNNPEQETHAKFPVLTVLKNNAVLKNILLVHDGNNEDQTVLIGRHPDCNIVLMHPSVSRFHLRICSNPSSLTLSLVDLASVHGTWVRGMKLEPGVRVELKEGDTFTVGVSTRLYRLSWVPLTQLNAFLPHQQQKEDEQEEIIKDENWEYTVEQEIPEAEDMVSLCCDEESKSHSEDKVLGVINGTETSCFPTHSGGENIHCDCQNSVLSPPHVQSPPYAKSVDELDYTEKIEACPKVEMPGETNLLCTLREYFTQNLCLPVVEAVQGTKMQQFQAPHGTFTKQQPSLKMLWSSLSTDIDSATFDERDGVAVAVIPTESDSGCTQGDTDKVEDILTTGPRIFNSEKTCLIVEKDLPDSEFHQMEVVEEFSVDSVPEGEKQGEIHWSSLPTNIGPSSFDVKDVAAVAAILTESEFGFTYGDNDKVGNILTSGLRTSNSANTCLIVDKDIPDSVFHQMEVVEEVSMDSIRDEEKQDECKEEYMSKLQDQNGKSFLEEGYSRDEIVEDNGNNCIKSIYPASFNEKSLAVVTLIPTESEFGCTLGDNEMIEDILETESRTINPENTSLLDEEVIPVSKFQPINIVEDVVVDSISDGGKEDKCGKELESKLQASLDAKSCQEPGNSVDEIAEDNGKICTKSISSTSFHVESPSSSLLQEVVLNIAAENQTPQSLTSLTGCSGGEFLEKHVESTEKSSTFGSIWSRRCKGFSAPHIGARKRRFMSTSKVGTEVKKSNVNDAINKSMPKDLSSVFDVEEKIFTSNKENLSLNTYHLQLMRKKDKLEEIKLPTSQRSPNLSCFSPSIHSAKSTSDVSNKVNLTTKVAEEWKSQRKPLKCLINLVHEQDKMELKKKRVERVPFRSLMNSGGNHNSVVISAAESTDDAGICGKISNKCTKPSQHSSREQRRIWEMVVDTASLVNNESRKALQLLQGLKGTRLMIPRSGCMKQQFRLFRTTSEASLALEWIKECIEKTRWWIHIQSSMEECSPTLSASPQTQFVEESWAFPGFSISNKCASPAVEDHILDCALQYRRKENVGQLVLLSHDVTLKIKSMAKGLLCETVQQFRQSLANPFSERFMWPKSSPRGLTWSCQDDLVLREKYCGLPSKAGLKLITEQL 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02244 1122 CDD FHA_PS1-like 24 133 - -
Phco6g02244 1122 SUPERFAMILY SMAD/FHA domain 25 143 IPR008984 GO:0005515
Phco6g02244 1122 ProSiteProfiles Forkhead-associated (FHA) domain profile. 52 103 IPR000253 GO:0005515
Phco6g02244 1122 SMART FHA_2 51 103 IPR000253 GO:0005515
Phco6g02244 1122 Gene3D - 912 1075 - -
Phco6g02244 1122 Pfam PIN domain 917 1067 IPR002716 -
Phco6g02244 1122 Gene3D - 3 133 - -
Phco6g02244 1122 PANTHER TRANSMEMBRANE PROTEIN 18 13 1119 - -
Phco6g02244 1122 Pfam FHA domain 53 120 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02244 Phco-Chr6 43624659 43628942 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02244 6 43624659 43628942 Phco6g02244 6 43624659 43628942 ECH