Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02019 ATGCGAAGAACCCCGCAAACAGAAACAAATTTGATTACTTTTTATATTATTTTTTTCGAAGACAGAGAGAGAAGAAGGGCAACAATAAATCCAAATCAAAATCAAATCCTCAACGAGCGCTTTTCAAAACGGTCCCTTTCGTCAAAACGGCTATATTCTCTCTCTCTCTCTACAATTCAAACTTCAAACTCATTTTCATTCTCTAAAGGAAATCAACTCATTCCTCTTCTCACTCAGCACCGACGACGGAAAACCTCAACACGAAGCGATTCTCAGATCCCTTGCGTTGTTCAGATACAAGTGCCCAAAATGTCCAAACCTCAAAATGATCCCCTTCTGCAGTCGGAAACAAGTTGTGGAACACTTCTCTATGAACTTCAGATAATATGGGACGAAGTTGGGGAGTCTGAAACTGACAGAGATAGAATGTTGTTTGAGCTTGAACAAGAGTGTCTAGAAGTATACAGAAGGAAGGTAGATCTGGCAAATCGGTCTAGAGCTCAATTAAGGCAGGCAATTGCTGATTGTGAGGCAGAACTTGCAGCCATTTGTTCATCAATGGGAGAGAGACCAGTGCATATTCGTCAGACTGATCAAAATGTTGGAAGCCTCAAGGAAGAGCATGCAAGAATTCTTCCGCAGTTGGAGGAGATGCAAAAAAGGAAATCTGAGCGTAGAAATCAATTCATAGAAGTTCAAGAGCAGATTCAAAGCATTTCAATTGAAATACATGGTCCTAGAGAGTATATTCCCGCTGTCATAGATGAAACTGATTTATCCGTGAGAAAACTCGAAGAATTGAACAGGCAGCTACATGCACTTCAGATTGAGAAGAGTAGTCGCTTAAAGCAAGTCCAGGAGCATCTCTATACATTAAATTCTCTATGTCTAGTGCTTGGTTTGGACTTCAAGCAGACAATTAACGGAATTCATCCCAGTTTATTGGAATCAGAAGGACCTAAGAGTGTAAGTAATGACACCATTCAACGATTGGCCGTTGCTATAGAAGAACTGAGGGAGGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCTACTACAATGTTGGAGCTCTGGAACTTAATGGATACCCCTGTTGAAGAGCAACAGTTGTTTCAGAATGTTACATGTAATATAGCTGCTTCAGAACACGAAGTAACTGAACCAAACACCTTGTCAATGGAGTTCATCAATTTGGTTGAGGAAGAAGTAGCTAGGTTAGAAATGTTAAAATCAAGCAAGATGAAAGAGCTTGTGTTAAAGAAGAGAACAGAGCTGGAGGAGATTTGTCGAAAGACTCATTTAATTCCAGAAATAGATAATGCAGTGGAATATGCTGTTGACGCCATAGAATCTGGTTCTGTGGACCCTGCTTGTGTGCTTGAACAAATTGAACTTCAGGTTGCCCAAGTCAAAGAAGAAGCTTTTAGCAGAAAAGAGATACTTGAAAAGGTTGAGAAATGGTTGGCAGCATGCGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGATAATCGATACAATGCGGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTCAACAAAATTCCTGCAATGGTGGATGGTCTGACTTCAAAAACTATTGCATGGGAGAAGGAAAAAGGCGTTGAGTTCACATATGATGGTATTCGTCTACTTTCTATGCTTGAAGAATACAATATATTACGCCAAGAGAAAGAGCAAGAACGCCGTAGGCAGCGGGACTTGAAGAAACTCCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGGTCAAAACCAAGCCCTTCAAAGCCCCAGAGTATCAAAAAGGGGCCTAGGATGTCAACAGGAGGAGCAACTAGTAGAAGAGTCTCGCTTGGGGGAGCAATGCTTCAAACTCCAAAGCCTGATTCAAAAGCTACTCACTCACGTGCCATGAGAAAGACTGAGAAAGGGCACCAAATTGAGCATTTAAATTATCTGGATGATAGCATTTCAGGTTTATCAGCAGCTAGAAGAGGGTTGGATATTGCTGGGGTTCCTGTTAAAAAGCACTCATTTGGTGCTGGGACTCAAATCACAGAATCTCCTCTGACACGACAACCTTTTTCACCCATCTCTTCTAACAATGTAGCTTCAAAAGCAAATGTGGCAAATGCTACAGATGAACTGAATAAACAGGGTGAGAAGTTGCAGAGAACACTGTCGCTTAACAATGTGCCATTCACTACTCCATCCAAGACAGCTACTTTGGTAGATGAAGAGAATAGAACTCCAAAGACAATAATGCCTATTCCTTTCCCAGCTACCCCATCGACAGTATCAGTTCCAATGAATATGGCTATGACTCCAGCTCCTTCATCAATTATGAAGAATATAAACTTGAATTCAACTCTCACAACATCAGTTCCTTATGGAAATGACTTGGTTCAAGAGATAGAATATTCCTTTGAGGAAAAAAGGCTCGCTTTTATGATGTTAGCATGA 2499 0.4134 MRRTPQTETNLITFYIIFFEDRERRRATINPNQNQILNERFSKRSLSSKRLYSLSLSTIQTSNSFSFSKGNQLIPLLTQHRRRKTSTRSDSQIPCVVQIQVPKMSKPQNDPLLQSETSCGTLLYELQIIWDEVGESETDRDRMLFELEQECLEVYRRKVDLANRSRAQLRQAIADCEAELAAICSSMGERPVHIRQTDQNVGSLKEEHARILPQLEEMQKRKSERRNQFIEVQEQIQSISIEIHGPREYIPAVIDETDLSVRKLEELNRQLHALQIEKSSRLKQVQEHLYTLNSLCLVLGLDFKQTINGIHPSLLESEGPKSVSNDTIQRLAVAIEELREVKLQRMQKLQDLATTMLELWNLMDTPVEEQQLFQNVTCNIAASEHEVTEPNTLSMEFINLVEEEVARLEMLKSSKMKELVLKKRTELEEICRKTHLIPEIDNAVEYAVDAIESGSVDPACVLEQIELQVAQVKEEAFSRKEILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDGLTSKTIAWEKEKGVEFTYDGIRLLSMLEEYNILRQEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSIKKGPRMSTGGATSRRVSLGGAMLQTPKPDSKATHSRAMRKTEKGHQIEHLNYLDDSISGLSAARRGLDIAGVPVKKHSFGAGTQITESPLTRQPFSPISSNNVASKANVANATDELNKQGEKLQRTLSLNNVPFTTPSKTATLVDEENRTPKTIMPIPFPATPSTVSVPMNMAMTPAPSSIMKNINLNSTLTTSVPYGNDLVQEIEYSFEEKRLAFMMLA 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02019 832 Coils Coil 264 284 - -
Phco6g02019 832 MobiDBLite consensus disorder prediction 603 626 - -
Phco6g02019 832 FunFam 65-kDa microtubule-associated protein 6 469 602 - -
Phco6g02019 832 MobiDBLite consensus disorder prediction 596 647 - -
Phco6g02019 832 Coils Coil 152 179 - -
Phco6g02019 832 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 114 674 IPR007145 GO:0000226|GO:0008017
Phco6g02019 832 Coils Coil 561 591 - -
Phco6g02019 832 Coils Coil 215 235 - -
Phco6g02019 832 Gene3D - 468 602 - -
Phco6g02019 832 Pfam Microtubule associated protein (MAP65/ASE1 family) 121 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02019 Phco-Chr6 39922396 39927512 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02019 6 39922396 39927512 Phco6g02019 6 39922396 39927512 ECH