Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01998 ATGGTAGTTACGAGCTGTTGGAGTTCTTCTTCGTGGCTGCCTATGTCACTGCCGCTGCCATGGAATTTGAAGGCAGCAACAACGGCACTGTCACTGAAATTGAAATGTGAAGCGTTTTCTGAAGGTTCTTGTTGTCTTGTTCACAACGACCAAGAGGATATGCAAGCTCTCTTACAGATCCTTCCATCTGATTTGCATCGTAGTCTCCTCGATCAATCGAATCGCTCTCAACTTCTAGAGGTTGTATTGGATTTGGGTCGTTTGCCAGAAGCGCGTTATTTAGGAAAACACGGAGGCCACTGTTTAAGGAACACGGAGGTAACTGTGAAGGAGTTGGAATATGCTGAACAAGCTGTTGGAGAGTTTGGGAAGGACAATAGAGCTGGAATTGAGGGTACTTTGCACAGAATATCTGCAATTAGGAGTAGGAATGGTCACATAGTTGGCTTGACTTGTCGGGTCGGGAGAGCAATCACTGGCCAGATTGACATGGTTTATGACCTGCTTCAATATGGGAAGAGCATTTTGTTTGTTGGAAGGCCAGGGGTTGGCAAAACTACTGTTATGCGTGAGATTGCTCGTGTACTGTCTGAGGAGCTTCACAAAAGAGTGGTGGTTGTTGATACTAGCAATGAAATTGGAGGTGATGGCAATATCCCACATGCAGCAATTGGTGGTGCACGAAGAATGCAGGTGCGGGAGCCATCAATGCAACACAGAGTGATGATTGAGGCAGTGGAAAATCACATGCCTGAGGTGATTATAGTTGATGAGATTGGCACAGAAGCTGAAGCTCATGCTTGCCGATCAATTGCTGAGCGCGGAATCATTCTTATTGGGACTGCTCATGGGCAGAAGCTTGAGAATATCATTAAGAATCCTACCCTTTCTGATCTGATTGGCGGAATAGAAACTGTTACTCTGGGAGACGCAGAAGCCAGAGTGAGAAATTGTCCGAAGACAGTTCTTGAGAGGAAAGCACCTCCAACATTTGATTTCTTAATTGAGATGAGAGATAGACACTACTGGCTCACACATAAGACTGACAAAAGTGTAGATATGTTGCTTCGGGGAAAAAGTCCACAGGTTGAGGTAAGAAAAAAAGATGAAAAATGTAAGGCCGTGATAGAAAAATCTAAGGCATACGATAAATGCCTATGA 1161 0.4462 MVVTSCWSSSSWLPMSLPLPWNLKAATTALSLKLKCEAFSEGSCCLVHNDQEDMQALLQILPSDLHRSLLDQSNRSQLLEVVLDLGRLPEARYLGKHGGHCLRNTEVTVKELEYAEQAVGEFGKDNRAGIEGTLHRISAIRSRNGHIVGLTCRVGRAITGQIDMVYDLLQYGKSILFVGRPGVGKTTVMREIARVLSEELHKRVVVVDTSNEIGGDGNIPHAAIGGARRMQVREPSMQHRVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGIILIGTAHGQKLENIIKNPTLSDLIGGIETVTLGDAEARVRNCPKTVLERKAPPTFDFLIEMRDRHYWLTHKTDKSVDMLLRGKSPQVEVRKKDEKCKAVIEKSKAYDKCL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01998 386 SMART AAA_5 171 307 IPR003593 GO:0016887
Phco6g01998 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 314 IPR027417 -
Phco6g01998 386 PANTHER KINASE-RELATED 49 367 - -
Phco6g01998 386 Pfam Sporulation stage III, protein AA 146 300 IPR045735 -
Phco6g01998 386 Gene3D - 146 357 IPR027417 -
Phco6g01998 386 CDD AAA 166 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01998 Phco-Chr6 39620412 39628888 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01998 6 39620412 39628888 Phco6g01998 6 39620412 39628888 ECH