Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01490 ATGATACGGGCTTCAGCCCAAATACAGGAGCCCCACCTAAGAATGAAAAATACTAAAATAGCCTCGTGGGAGACATGGACTGGAACGAAGACGAGTTCGTGGGAAGAAATGCCGAGTGAGGTAGATGATGGTGTTGCAGAAGAACAGGGAAGACCTCTCATCATCAACCATGATTTTGATTCTTCAATTCACATCCTTCATCAAAATGAAGACACCATCTCTTCTTTGCCATTCAGTCACACGGACACGCTATCTTTACCCTCTCTTTCCGTTCCTAACCAACGCCTTGCTTCTCTCGATGTCTTCCGCGGTCTAACCGTTGCGTTGATGATATTAGTTGATAATGTGGGAAGAGAATTCCCGTCCTTGAATCATTCACCATGGTTTGGGGTGACTCTAGCCGATTTTGTAATGCCATTTTTTCTCTTTGTGGTTGGCGTTTCGATTGCTCTTGTATTCAAGAAAGTCTCTAGCAAACCCAATGCCACGAAAAAAGTTGTATTGAGGACAATTAAGCTTTTCCTTTTGGGGCTGTTACTTCAAGGTGGGTATTTCCATGGGCGTGGCAAATTGACGTATGGAGTTGATTTGAGCAAGATTCGCTGGTTTGGTGTACTTCAGAGGATATCTATTGGATATTTCTTGGCCTCAATATCAGAGATTTGGCTTGTAAACCATAATATTTTGGTTGACTCACCGGCAGCTTTTGTGAGGAAATACTCCATCCAGTGGATGTTTTCTATCTTACTATGCTCTGTGTACCTTTGCTTGCTCTATGGTCTCTACGTCCCAAATTGGAAATTTGAACATTCTAATTTGCTTGGGCCCAGTCATTTATCAATTATTCAAAGTGTTCACTGTGAAGTGCGGGGCAGTCTTGAACCTCCTTGTAATGCTGTGGGATTTGTTGATAGATTAATTCTTGGTGAAGATCATTTATACCAGCGACCTGTGTACATAAGAACAGAGGAGTGTAGTGTCAACTCTCCTGACTATGGACCCTTGCCTCCAAATTCACCTGGATGGTGCCTTGCACCATTTGATCCTGAGGGTATTTTGAGTTCACTGATGGCTGCGATTACTTGTTTCATGGGATTGCAATTTGGGCGCATAATTGTACTTTTGCAGGATAACAAGCAGAGGGTACTTCTTTGGTCTGTGTTTTCCTTCGCTCTATTGTTAGTAGGATACATTCTGGAGATTTTAGGAATTCCTTTATCAAAAGCACTGTACACGTTAAGCTACATGTGCATAACTGCAGGGGCATCGGGCTTAGTCTTGACTGCCATCTATTACATCGTTGACATAGAACATCACAGAAAGCCGACAATTTTACTGCAATGGATGGGAATGAATGCTCTTGTTGTATATGCATTGGCAGCTTGTGACATTTTCCCAGCAGTTATCCAGGGTTTCTATTGGCATTCTCCTGAAAATAATTTGGTTGACGCCACTGAAGCTTTAATGCAGGCCATACTTCATTCCGAAAGGTGGGGTACAATGGCCTTTGTAACGGTTGAGATTTTATTCTGGGGAATTTTTGCTGGTTTCCTCCACAAGAAAGGGATATATATAAAATTGTAA 1584 0.4223 MIRASAQIQEPHLRMKNTKIASWETWTGTKTSSWEEMPSEVDDGVAEEQGRPLIINHDFDSSIHILHQNEDTISSLPFSHTDTLSLPSLSVPNQRLASLDVFRGLTVALMILVDNVGREFPSLNHSPWFGVTLADFVMPFFLFVVGVSIALVFKKVSSKPNATKKVVLRTIKLFLLGLLLQGGYFHGRGKLTYGVDLSKIRWFGVLQRISIGYFLASISEIWLVNHNILVDSPAAFVRKYSIQWMFSILLCSVYLCLLYGLYVPNWKFEHSNLLGPSHLSIIQSVHCEVRGSLEPPCNAVGFVDRLILGEDHLYQRPVYIRTEECSVNSPDYGPLPPNSPGWCLAPFDPEGILSSLMAAITCFMGLQFGRIIVLLQDNKQRVLLWSVFSFALLLVGYILEILGIPLSKALYTLSYMCITAGASGLVLTAIYYIVDIEHHRKPTILLQWMGMNALVVYALAACDIFPAVIQGFYWHSPENNLVDATEALMQAILHSERWGTMAFVTVEILFWGIFAGFLHKKGIYIKL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01490 527 PANTHER LD22376P 75 513 - -
Phco6g01490 527 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 95 230 IPR012429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01490 Phco-Chr6 15636811 15642957 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01490 6 15636811 15642957 Phco6g01490 6 15636811 15642957 ECH
Phco2g02064 2 51388320 51391683 Phco6g01490 6 15636811 15642957 PCT