Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01467 ATGGAAGGGAAAGAGAGAAAGATTGTGGTGGCTGTGGATGAGAGCCAAGAGAGCATGTATGCACTCTCTTGGTGCATCACCAATCTTGTTTCTGATACCAACAAGCTTGTGCTCCTTTACGTTAAGCCACCCTCTGCTTTCTACTCCTTGGATGCAGCAGGGTATATCTTTTCTAATGATGTTATTGATGCTATGGAAAAGTACAGCATGCACTTGGTTAATTCAGTAATGGAAAGAGCTGAAGCTACACGTAGAAATTTGAAGGCTACTAATGTGAACATGGAGAGGGTAATTGGGATAGGAGATGCGAAGGATGTAATATGCAGTGTAGCCAAGAAACTAGAGGCTGACACCTTGGTGATGGGAAGTCATGGCTATGGATTCTTCAAGAGGGCAATCCTTGGAAGTGTGAGTGATCACTGTGCCAAACATGCTGAGTGTCCTGTTGTAATCGTGAAGCACCCATAA 468 0.4402 MEGKERKIVVAVDESQESMYALSWCITNLVSDTNKLVLLYVKPPSAFYSLDAAGYIFSNDVIDAMEKYSMHLVNSVMERAEATRRNLKATNVNMERVIGIGDAKDVICSVAKKLEADTLVMGSHGYGFFKRAILGSVSDHCAKHAECPVVIVKHP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01467 155 Coils Coil 77 97 - -
Phco6g01467 155 Pfam Universal stress protein family 6 153 IPR006016 -
Phco6g01467 155 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 154 - -
Phco6g01467 155 PRINTS Universal stress protein signature 113 125 IPR006015 -
Phco6g01467 155 PRINTS Universal stress protein signature 5 23 IPR006015 -
Phco6g01467 155 PRINTS Universal stress protein signature 131 153 IPR006015 -
Phco6g01467 155 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 154 - -
Phco6g01467 155 CDD USP_Like 7 152 - -
Phco6g01467 155 Gene3D HUPs 1 155 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01467 Phco-Chr6 15284352 15285100 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02577 2 55597358 55598375 Phco6g01467 6 15284352 15285100 ECH
Phco6g01467 6 15284352 15285100 Phco6g01467 6 15284352 15285100 ECH