Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01366 ATGACGATGCTCACCACCTCAGAAATAGTTTGTCACCTCGCACATTATGCGTATTGGTGGGGTCCTCCTACAAATTCATATACATATATCAATACATTTTGTAAGCCACGAACCACCATTTCGTGCAGTAGAGGTATTACATTGGAACACTCTAGTTTACTTTCGGGCAAAGCTAAGATGGATACTGCTCTCAGGAATGTTGGAGTCAAGTACGAGTGCTTGCTTTTTGATATGGATGACACTCTCTACCCGTTGAGCATAGGTCTCAATTTGTTTTGTCGCAAGAACATACAAGAGTATATGCTAGAACACTTGCATATTGAAGAAAATGAAGTGCCAAAAATGTGCTTGGATTTGTATAGAGAATACGGGACAACTATGGCAGGATTGAAGGTCCTCGGTTATGACTTTGACAATGACGAGTTTCATGCTTACGTTCATGGAAGGTTACCATACGAGAAGCTGAAGCCTGATCCAGTATTAAGGAACCTTCTGATTTCCATGCCTCAACGTAAAATAATATTCACCAATGCAGATCACGCACATGCAGTTAAAGTTCTCAACAGAATGGGTTTGGAAGATTGTTTCGAGGGCATCATATGCTTTGAAACGCTTAATCCTCACAAACAATACATGGATTTACCGAATGATAATCATGTTCTCACAGATATAACAGAGAGTGGATGTTTCAATTCCCACACACGTATCCTCTGTAAACCATCTGTGGAAGCCTTTGAAGCTGCTATTCGGACTTCTAATGTGGATCCAAAGAAAACAATTTTCTTTGATGACAGTGTTAGAAATATTGCAAGTGCAAAAGTAGCTGGATTTCACACTGTCATATTGGGTCGTTCAGATTTGGTGCCTGGTGCTGATCATGCCCTGAATAGCATTCACAATATCAAAGAAGCATTACCTGAAATATGGGAGATTGAAGAAAGCAACCAACAGCAAAAGATTCAACCCCCAGCAGTGGAAACCATGGTTCTAGCTTGA 996 0.4046 MTMLTTSEIVCHLAHYAYWWGPPTNSYTYINTFCKPRTTISCSRGITLEHSSLLSGKAKMDTALRNVGVKYECLLFDMDDTLYPLSIGLNLFCRKNIQEYMLEHLHIEENEVPKMCLDLYREYGTTMAGLKVLGYDFDNDEFHAYVHGRLPYEKLKPDPVLRNLLISMPQRKIIFTNADHAHAVKVLNRMGLEDCFEGIICFETLNPHKQYMDLPNDNHVLTDITESGCFNSHTRILCKPSVEAFEAAIRTSNVDPKKTIFFDDSVRNIASAKVAGFHTVILGRSDLVPGADHALNSIHNIKEALPEIWEIEESNQQQKIQPPAVETMVLA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01366 331 SFLD C1.5.3: 5'-Nucleotidase Like 70 313 IPR010237 -
Phco6g01366 331 Gene3D - 131 309 IPR023214 -
Phco6g01366 331 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 64 320 - -
Phco6g01366 331 NCBIfam HAD-IA family hydrolase 236 281 IPR006439 -
Phco6g01366 331 SUPERFAMILY HAD-like 73 286 IPR036412 -
Phco6g01366 331 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 70 313 - -
Phco6g01366 331 NCBIfam pyrimidine 5'-nucleotidase 72 281 IPR010237 -
Phco6g01366 331 CDD HAD_5NT 73 284 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01366 Phco-Chr6 13753592 13756035 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01366 6 13753592 13756035 Phco6g01366 6 13753592 13756035 ECH
Phco2g02514 2 55078192 55080037 Phco6g01366 6 13753592 13756035 PCT