Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01297 ATGGAGTCCTTCGAGCCCAACGTAGATTCAAGTAATTCAGAAACGTTGCGAGAACCTAATCAAAAGAAACGCAGAAAAATCGGAGACCACGCCGCCGATCACAATTCCGCCAACGCTGTCCCTTGGAGATCCGACGCGGAGCAACGGATCTACTCCCGCCGCCTCGTCGAGGCTCTCCGCCGAACCCCATCATCGGCGGCCAAGCCTAGAGCAGCCGGCCAAGTCCGCGAGGCCGCCGACCGAGTCCTCGCCGCCACCGCCAGAGGCCGAACGCGGTGGAGCCGCGCGATTCTCGGACGGTGGAGGAAGCTCCGCACGCCACACAAGAAGGCGAAGAAGACATCGTCCACCGGATTGAAGAGAACCAGGATCAACGGCGGAGAGAGGAGGAACCGGTTACCGGCTGTGCAGAAGAAAGCGCGCGTTCTTAGCCGGTTGGTTCCCGGTTGCCGGAAGGTCTCGTTCCCAAACCTTCTGGAAGAAGCCACGGACTATATCTCCGCCTTGGAGATGCAAGTGCGAACCATGACGGCTCTAGCCGAATTACTCTCCGGCGGCGCTCCGGCTGGTCTCGACGGTGGCGCGTTGAGTTGA 594 0.6061 MESFEPNVDSSNSETLREPNQKKRRKIGDHAADHNSANAVPWRSDAEQRIYSRRLVEALRRTPSSAAKPRAAGQVREAADRVLAATARGRTRWSRAILGRWRKLRTPHKKAKKTSSTGLKRTRINGGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRTMTALAELLSGGAPAGLDGGALS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01297 197 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 183 IPR044660 GO:0006355
Phco6g01297 197 MobiDBLite consensus disorder prediction 1 15 - -
Phco6g01297 197 MobiDBLite consensus disorder prediction 106 128 - -
Phco6g01297 197 MobiDBLite consensus disorder prediction 1 45 - -
Phco6g01297 197 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 120 169 IPR011598 GO:0046983
Phco6g01297 197 MobiDBLite consensus disorder prediction 16 32 - -
Phco6g01297 197 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 185 IPR036638 GO:0046983
Phco6g01297 197 CDD bHLH_AtIBH1_like 125 180 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01297 Phco-Chr6 13040541 13041134 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01297 6 13040541 13041134 Phco6g01297 6 13040541 13041134 ECH
Phco2g02570 2 55514018 55514566 Phco6g01297 6 13040541 13041134 ECH
Phco2g02570 2 55514018 55514566 Phco6g01297 6 13040541 13041134 PCT