Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01276 ATGCAGCAAAAGAGTAGGAACAAGTTTGCTTGGAATGGGTTGAACTTACTAACTGTACTGAGGAATTTGAGGCTAAAAGGGATAAGCGCCAAAAGCAAAGAGAAGTGTTCCAGAAAACCAAACCCAGAACCGCCAATAGATTCAGTAAAAGTCCAAGTGAACTCGCCTTTGGATATGGCAGAAGAAGAACGCCGGATCCTAGTGGCAGTCGATGAAGGCGAGGAGAGCATGCACGCTCTCTCATGGTGCCTCAAAAATCTTGTTTTTCAAAATTCCAAAGACACCCTTATTCTTCTCTACGTCAAATCCCCTCGTGCCGTTTATTCTGCCTTCGATGGAACAGGATATTTGTTTTCCCCTGACGTAACGGCGGCCATGGAGAACTATGTGCAGAGAGTGGCCAATTCTGTCTTGGAGAAAGCCAAGAAACTGTGCAACAATGTTGAAAAAGTGGAGACGAGGGTAGAGAATGGCGATCCGAGGGATGTGATTTGTGATATGGCTCAAAAGTTGGGTGCTGATGTGTTGGTGATGGGAAGCCATGGCTATGGTCTCATCAAGAGGGCTTTCCTTGGAAGTGTTAGTAATCACTGTGCACAGAACGTGAAGTGCCCAGTTTTGATTGTGAAGAAGCCAAAACCAACCTCCGGAAAAGTATAA 660 0.4561 MQQKSRNKFAWNGLNLLTVLRNLRLKGISAKSKEKCSRKPNPEPPIDSVKVQVNSPLDMAEEERRILVAVDEGEESMHALSWCLKNLVFQNSKDTLILLYVKSPRAVYSAFDGTGYLFSPDVTAAMENYVQRVANSVLEKAKKLCNNVEKVETRVENGDPRDVICDMAQKLGADVLVMGSHGYGLIKRAFLGSVSNHCAQNVKCPVLIVKKPKPTSGKV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01276 219 Pfam Universal stress protein family 64 210 IPR006016 -
Phco6g01276 219 Coils Coil 134 154 - -
Phco6g01276 219 Gene3D HUPs 52 218 IPR014729 -
Phco6g01276 219 CDD USP_Like 65 209 - -
Phco6g01276 219 PRINTS Universal stress protein signature 63 81 IPR006015 -
Phco6g01276 219 PRINTS Universal stress protein signature 170 182 IPR006015 -
Phco6g01276 219 PRINTS Universal stress protein signature 188 210 IPR006015 -
Phco6g01276 219 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 63 211 - -
Phco6g01276 219 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 64 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01276 Phco-Chr6 12825800 12828435 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01276 6 12825800 12828435 Phco6g01276 6 12825800 12828435 ECH
Phco2g02577 2 55597358 55598375 Phco6g01276 6 12825800 12828435 PCT