Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01256 ATGAAGCAGCCGCCTGTCCCACTGGCAACCCTGATTGGCCGGGAGCTACGAAATGGAAAAATTGAAAAGCCTTTTGTGAAGTATGGGCAGGCTGGCTTGGCAAAGAAAGGAGAAGATTATTTTCTAATCAAGACGGATTGCCAGAGAGTTCCTGGGGATTCGTCAACACTTTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGTATATCTGCTGCTATTTTTGCGAAGGAAAACATACTAAGTAATGTTTTAAGTGCAATACCGCAAGATATCAGTAGGGATGAGTGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGTTGCTTTTGTGAAAACTGACATAGAGTTTCAGAAAAAAGGGGAAACTTCTGGAACAACAGCCACATTTGTTCTGATTGATGGATGGACTGTTACTGTTGCATCCGTTGGAGATTCCCGTTGCATATTAGATACACAGGGAGGTGTTGTCTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGAACGGATTACTGCCAGTGGTGGTGAAGTAGGAAGACTGAACGTTTTTGGAGGCAATGAGGTGGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTTTCTAGATCAATTGGTGACACGGATGTCGGAGAATTTATTGTGCCAATACCACACGTTAAGCAAGTGAAGCTTTCAAAAGTTGGTGGAAGACTTATTATTGCTTCTGATGGCATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGCCGGGGTCTACCTGCAGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGGGGGCTGAAGGATGATACAACTTGCCTCGTTGTAGATATTATTCCGTCAGATCATCCTGTTTTACCAACAATGCCAACAAAGAAGCATAATATGCTAACGTCCCTTTTATTTGGAAAGAAATCTCAAAACTCTACAAACAAAAGTACCAATAAGCTTTCTGCTGTAGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCTATGCTTACCGAGAGATTGGGTAAGGATTTTCCATCTAATACGAATTCTGGGATGTTCCGCTGTGCGGTTTGCCAAGCAGATCAACCCTCTGTAGATGGTTTATCAGTGAACACTGGGTCCTTTTTTTCTCCTCCATTATCTAAGCCATGGGAAGGTCCGCTCCTCTGTACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTAGCATGCCCTCAGAAACAGCATAG 1266 0.4408 MKQPPVPLATLIGRELRNGKIEKPFVKYGQAGLAKKGEDYFLIKTDCQRVPGDSSTLFSVFAIFDGHNGISAAIFAKENILSNVLSAIPQDISRDEWLQALPRALVVAFVKTDIEFQKKGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERITASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSKVGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTMPTKKHNMLTSLLFGKKSQNSTNKSTNKLSAVGVVEELFEEGSAMLTERLGKDFPSNTNSGMFRCAVCQADQPSVDGLSVNTGSFFSPPLSKPWEGPLLCTNCQKKKDAMEGKRSSMPSETA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01256 421 FunFam probable protein phosphatase 2C 5 27 294 - -
Phco6g01256 421 ProSiteProfiles PPM-type phosphatase domain profile. 17 289 IPR001932 -
Phco6g01256 421 SMART PP2C_SIG_2 42 289 IPR001932 -
Phco6g01256 421 Pfam Protein phosphatase 2C 55 272 IPR001932 -
Phco6g01256 421 CDD PP2Cc 35 289 IPR001932 -
Phco6g01256 421 Gene3D - 26 293 IPR036457 -
Phco6g01256 421 SMART PP2C_4 15 287 IPR001932 -
Phco6g01256 421 SUPERFAMILY PP2C-like 30 289 IPR036457 -
Phco6g01256 421 PANTHER PROTEIN PHOSPHATASE 38 288 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01256 Phco-Chr6 12678030 12680149 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02595 2 55741509 55743781 Phco6g01256 6 12678030 12680149 PCT