Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01018 ATGGAATTTGAAATTTTGGTTTGGTTACTTCTTCTCTTTGCAACTCCCCTTTGGTTCTTAGCCACAATACTAATTAAATCCAAACCACCACCCTCTCCTCCTTCTTCCACCACCACCACCACCACCACTACCGTTCCCAAAGTCTATCCTATAATTGGTTCCGTGTTGTCCATCATAGCAAACAAGCATCACCGCATTCAGTGGATCTCCGACATACTCCATGCCTCTCCCTCCTCCACCTTCGTCCTCCACCGTGCCTTCGGCTCCCGCCAACTCTTCACAGCAAACCCTACTGTAGTCCACCACATTCTCAAGACCAACTTCCAACTCTACCACAAGGGCCCAACCTTGAAATGCGCCCTTAAGGATTTTCTAGGCCAGGGCATTTTCAACACAGATGGCCCCAACTGGAAGCTTCAACGCCAAATCTCCAGCCACGAATTCAGCACTCACACTCTCCGCAAGTTCATCGAAACCGTCGTCGATGTGGAGCTCTCGGACCGCCTTCTGCCCCTCCTCGACGACGCATCCCGGAACAAAACCATCATTCCAGACTTCCAAAACATTCTCCAACGCTTCACCTTGGACAACATCTGCAAAATCGCTTTCGGCTTCGACCCCGAGTGCCTCCTCCGGGATGTCCCCTTCACAACCGCCCTGACCGACGCCACAATAATCTGCAGTAATAGACTCAACGCTGCCTTCCCTCTAATTTGGAAAACCAAAAAACTCCTTAACGTAGGGTCGGAGAAGCGCCTGAAGGAAGCGATCTCCGAAGTAAAGGATCTGGCAAGGAGAATAATGAGAGAGAAGAAAAAAGAGCTTCGGGAAAAGGAAACCCTAGATTCCATGGATCTGTTGTCACGGTTTTTATGCTCAGGCCATTCGGACGAAGAGTTCGTTGTAGATATAATCATCAGCTTTATCGTCGCTGGGAGGGACACAACCTCAATAGCACTCACCTGGTTCTTCTGGCTCCTTTCTAAACACCCGCACGTGGAGGAGGAGATTCTCAAGGAGGTGACGCAGAAAGACACGGTGTACCCACACGCGTGTGAGGAAATGAAAGACATGGTTTACACGCATGCGGCGTTGTGTGAGAGCCTGAGGCTTTACCCACCCGTTCCGATGAACTCCAAAGAGGCTATGAGCGATGATGTTTTACCGAACGGAAGTTTGGTGAAGAGAGGGTGGAGGGTGACGTATCATATTTACGCCATGGGGAGGTCGGAGAAGATTTGGGGCCCGGATTGGGCGGAGTTTCGGCCGGAGAGGTGGCTGAGTTGGGAGGAGGTGGAAGGGAGGTGGAGGTTTCAGGCTGTGGATGCTTTTACCTATCCCGTGTTTCAGGCTGGCCAAAGGGTCTGTTTGGGTAAGGAAATGTCGTTCTTGCAAATGAAAAGAATGGTGGCCGGGATTTTGAGACGCTTTAAGGTGGTTTCCAACGTGGCGGAACCCGTGTACGGTGGCTACTTCACTTCTTTCATGGTGGGTGGCTTCCCCGTCACGATTCAGAATCGTAATTAA 1527 0.5082 MEFEILVWLLLLFATPLWFLATILIKSKPPPSPPSSTTTTTTTTVPKVYPIIGSVLSIIANKHHRIQWISDILHASPSSTFVLHRAFGSRQLFTANPTVVHHILKTNFQLYHKGPTLKCALKDFLGQGIFNTDGPNWKLQRQISSHEFSTHTLRKFIETVVDVELSDRLLPLLDDASRNKTIIPDFQNILQRFTLDNICKIAFGFDPECLLRDVPFTTALTDATIICSNRLNAAFPLIWKTKKLLNVGSEKRLKEAISEVKDLARRIMREKKKELREKETLDSMDLLSRFLCSGHSDEEFVVDIIISFIVAGRDTTSIALTWFFWLLSKHPHVEEEILKEVTQKDTVYPHACEEMKDMVYTHAALCESLRLYPPVPMNSKEAMSDDVLPNGSLVKRGWRVTYHIYAMGRSEKIWGPDWAEFRPERWLSWEEVEGRWRFQAVDAFTYPVFQAGQRVCLGKEMSFLQMKRMVAGILRRFKVVSNVAEPVYGGYFTSFMVGGFPVTIQNRN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01018 508 CDD CYP86A 80 500 - -
Phco6g01018 508 PANTHER CYTOCHROME P450 39 500 - -
Phco6g01018 508 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 Gene3D Cytochrome P450 42 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 SUPERFAMILY Cytochrome P450 46 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g01018 508 Coils Coil 246 273 - -
Phco6g01018 508 Pfam Cytochrome P450 46 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01018 Phco-Chr6 10039565 10041091 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01818 2 48722156 48723910 Phco6g01018 6 10039565 10041091 PCT