Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01011 ATGCATGCTCTCTGTCTTGCACTTCTCACCGACATGCACCAAGAGTATAATGGAAAGCCCACCTTCACAGAGATCGTGGTGGCTTCCTCCATTGGGTTGATATTTGCTGCAGCAATGCATTATCGAGTTAAGAAAATGAGAGATCGAAAGATCATTCCACGTCTCAGAATATCAAAGGCAAACCATACCCCAAAGCTTGAAAAGTTCCCTCATTACGTAGCTAGACAAATGGGGTTCAAAGATAGGAGATGCTGTCCTCATCTTTGTAAATTGGCTGCTGAATACATAAGGAAATCCGAGGGATGTGAAGATGATCTCTACGCCTTCTTTGAGAATGAACCAGATGCTGATTCGCTTTTTGTGAAGCTTGTGGAGGAGTTTGAGAGATGCATTCTCAGTTACTTTGCATTCCATTGGAGATTTGGTGATGCTTTAATAAGTCAGGTGTTTAGCTCTGAAATTGAACCAAGAGCAAAGCTCAGGCGCATAGTTATGGCGGCAACTAGGGAACAAAGGATCGACAGAGTGACCAAGAATCTGAAGGTGGCTAGAGTTTTCAACACATTAGTGGAAGAAATGAAAGCAATGGGACTGACAAATGATGACTCCCAATGCACAGAGGTGATGGCCCCAGTGGCTCACAGTGATAGGAGCCCAGTGCTTCTTTTCATGGGTGGTGGCATGGGAGCTGGCAAGAGCACTGTGCTTAAGGATATTCTGAAAGAACCTTTCTGGGCAGGAGCAGCAGGCAATGCTGTCATCATTGAGGCCGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTCAGTGCAAGAGGGCATCAGGACATGATTCGAACAGCTGAACTGGTACACCAATCATCTACAGACGCAGCCTCATCCCTCCTGGTGACAGCACTAAATGAGGGGCGTGATGTAATAATGGACGGTACACTTTCCTGGTTACCATTTGTTGTGCAAACAATAACAATGGCTAGAAATGTCCATCGCCGCCGCTACCGCATGGGACCTGGCTACAAGATGAATGGCGATGGAACTGTAACTGAAAACTACTGGCAGCGAATTGAGGAAGAGCAGGAACGAGTTGAAGGCAAAAGGAGAAAACCATACAGGATAGAGCTGGTTGGAGTAATATGTGATGCCTACCTTGCTGTCATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTGAGAGTGAAGTCACAATTGACATCGCACAAGAGATTTGCTGATGCATTTCTGACTTATTGTCAGCTAGTTGACAATGCTAGGCTATATAGTACAAATTCTTTGGAAGGTCCACCTAAGTTGATAGGATGGAAAGATAGAGACAAGACATTGCTCGTTGATCCAGATGAAATAGATTGTTTGAAGAGGGTTGCTACATTGAACGACTCTGCCAACAACATCTATGAACTTTACAAGCACCCCAACCCAACTTGTGAAGCTGGATCCATATGGAAAGACATTGTACTATCTCCTTCAAGGTTGAACGTCCAAAAAGAGCTGAAGTATTCAATCCAAAAGATTGAGAGATTAAGAATATAG 1557 0.4432 MHALCLALLTDMHQEYNGKPTFTEIVVASSIGLIFAAAMHYRVKKMRDRKIIPRLRISKANHTPKLEKFPHYVARQMGFKDRRCCPHLCKLAAEYIRKSEGCEDDLYAFFENEPDADSLFVKLVEEFERCILSYFAFHWRFGDALISQVFSSEIEPRAKLRRIVMAATREQRIDRVTKNLKVARVFNTLVEEMKAMGLTNDDSQCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVIIEADAFKESDVIYKALSARGHQDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWLPFVVQTITMARNVHRRRYRMGPGYKMNGDGTVTENYWQRIEEEQERVEGKRRKPYRIELVGVICDAYLAVIRGIRRAIMCRRAVRVKSQLTSHKRFADAFLTYCQLVDNARLYSTNSLEGPPKLIGWKDRDKTLLVDPDEIDCLKRVATLNDSANNIYELYKHPNPTCEAGSIWKDIVLSPSRLNVQKELKYSIQKIERLRI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01011 518 PANTHER UNCHARACTERIZED 14 516 IPR044802 -
Phco6g01011 518 Pfam Zeta toxin 213 325 IPR010488 GO:0005524|GO:0016301
Phco6g01011 518 Gene3D - 202 438 IPR027417 -
Phco6g01011 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 357 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01011 Phco-Chr6 9957823 9963964 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01011 6 9957823 9963964 Phco6g01011 6 9957823 9963964 ECH
Phco2g01814 2 48658806 48662769 Phco6g01011 6 9957823 9963964 PCT