Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01002 ATGAGCAAAATCCGTCGCTGCCAGAGGATTCTCATCCTCTCTCTTCTCTCTCTCTCCGTCGTCGCTCCCCTCGTCTTCGTCTCTCACCGCCTCAACCTTCTCACTCCTCTCGGAAGAAGAGAGTTTCTCGAAGATTTATATCGCGCTACATACAGGACGGATACTTTGAAGTTAAATGCTGTAGAACAGGAAGATGCTGAAGAATTAGAAGAACCAAATCAAGTTGTTTATACGGTAAAAGATTTTGTTTCAACAATTGGTTACGATTCAGAAAACAATCATGATTCTAAGGAATCTAGAAATGCGGGATACAGTGGCGCCACTTTGGAAATAAATGGATTCAATCAACACGAAAGACAACACCAGGGAACTCAGCAGAATGAATTATCCTTCACGTCTCAAGGTAGGAATATACATGATTCACAGAGAATGTTGGAGAAGAATATTGGAGTAACAACTAAGAAGGTTCAAGAGATTAAGGATCAACTTATTTTAGCCAAAGCATACTTGAAAATTGCACCACCAAGCAGCAATTTGCGCTTGAGAGATTTGGAGCGGTTATCAAGAGAGATGGAATTAGTAGTTGGTGAAGCCACCCAGGATTCAGATCTGTCAACGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAGTCTACCGTGCTTTCCCAGAGTGTTCTAATATGGCTGCAAAGCTCAATACTATGAAGCGTCAGGTTGAAGAGCAAGTCCGTTCTCAGCGACATCAAGCAACATATCTTGTACATCTTGCTGCAAGGACTGCCCCAAAAGGCATTCACTGTCTTTCTATGCAGTTGACTGCAGCATACTTTGCCTTGAGGCAGGAGGAGAGAAAGCTTCCAAATGAAAATAATATTCATAGCCCAGAACTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCAGCAGTTGTTAACTCTACCATCTCATCTGCCAAGGAACAGGGGAAACTTGTTTTCCATGTATTGACCAAATCACCCAACTTACCAGCAATCTCAATGTGGTTCTTGTTAAATCCTCCTGGCAAAGCTACAGTCCACATACAGAGCATAGACAACTTTGAATGCTTGTCCAAGTACAATTTCTTCCAGGAAAATAACTCCAGTGATCCAAGATACACCTCTGAATTGAACTACCTGCGTTTCTACCTTCCAGACATTTTTCCTGCTCTAAATAAGATTGTCCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGTGCACTCTGGAATATGGATATGAAGGGAAACGTAATTGGAGCAGTTGGAACTTGTCAGGAAGGAAAAATTCCATTTCATAGGATTGACACGTTCTTAAACTTTTCAGATCCATTAATCGGAAAGAGGTTTGATGTCAATGCTTGCACATGGGCATTTGGGATGAACTTGTTTGATTTGCAACAGTGGAGGAGACACAATTTAACTGCTGTCTACCTCAATTATTTGCAAATGGGCTTGTGGAACGTTGGAAGTCTACCTTTAGGCTGGCTCACTTTCTATAACAAGACAGAGTTGTTGAATAGACAATGGCATATTCTTGGCCTTGGTTATAGTTCGGATGTCGATCGAATTGAGATTGAGCGGGCTGCCGTTATACACTATGATGGGCTTAGGAAGCCGTGGTTGGATATTGCCATGGGCAGATATAAAAGCTTTTGGACCAAATATTTAAATTTTGACAACCATTTTTTGCAACAATGCAATCTCCAGGCATAG 1758 0.4164 MSKIRRCQRILILSLLSLSVVAPLVFVSHRLNLLTPLGRREFLEDLYRATYRTDTLKLNAVEQEDAEELEEPNQVVYTVKDFVSTIGYDSENNHDSKESRNAGYSGATLEINGFNQHERQHQGTQQNELSFTSQGRNIHDSQRMLEKNIGVTTKKVQEIKDQLILAKAYLKIAPPSSNLRLRDLERLSREMELVVGEATQDSDLSTSALQKMRHMEASLSKVYRAFPECSNMAAKLNTMKRQVEEQVRSQRHQATYLVHLAARTAPKGIHCLSMQLTAAYFALRQEERKLPNENNIHSPELYHYAVFSDNVLACAAVVNSTISSAKEQGKLVFHVLTKSPNLPAISMWFLLNPPGKATVHIQSIDNFECLSKYNFFQENNSSDPRYTSELNYLRFYLPDIFPALNKIVLFDHDVVVQQDLSALWNMDMKGNVIGAVGTCQEGKIPFHRIDTFLNFSDPLIGKRFDVNACTWAFGMNLFDLQQWRRHNLTAVYLNYLQMGLWNVGSLPLGWLTFYNKTELLNRQWHILGLGYSSDVDRIEIERAAVIHYDGLRKPWLDIAMGRYKSFWTKYLNFDNHFLQQCNLQA 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01002 585 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 304 580 IPR029044 -
Phco6g01002 585 Pfam Glycosyl transferase family 8 271 559 IPR002495 GO:0016757
Phco6g01002 585 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 380 583 IPR029993 GO:0047262
Phco6g01002 585 SUPERFAMILY Nucleotide-diphospho-sugar transferases 302 582 IPR029044 -
Phco6g01002 585 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01002 Phco-Chr6 9840115 9845411 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01002 6 9840115 9845411 Phco6g01002 6 9840115 9845411 ECH
Phco2g01808 2 48586190 48591713 Phco6g01002 6 9840115 9845411 PCT