Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01001 ATGGCAACCATCTCCGCTGCTACAACCACCCCATCGATCACCCGCGCATGTCTTGTGCAAAAGCGGCCTCTTGGGGTCTCATCTCCTGTTCTTGGATTGCCAACAATGGGTAAGGTGGGAAGAGTGAGGTGCTCCATGGAGGAAAAACCTTCTGTGAAGGAAAGCAGCTCAAGTATGGGGATGGGAGCATCTTTGATGGCAGCTACCTGTGCTGCAGTCATGTCAGGCCCAGCCATGGCCTTGGTGGATGAGAGACTGAGCACTGAAGGAACCGGGCTTCCCTTTGGGCTTAGCAACAACCTTCTTGGTTGGATCCTGTTCGGTGTCTTTGGTCTTATATGGGCTCTCTTCTTTGTCTACACTTCTACTCTTGAAGAGGATGAAGAGTCGGGATTGTCTCTTTAG 405 0.516 MATISAATTTPSITRACLVQKRPLGVSSPVLGLPTMGKVGRVRCSMEEKPSVKESSSSMGMGASLMAATCAAVMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLEEDEESGLSL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01001 134 Pfam Photosystem II reaction centre W protein (PsbW) 1 134 IPR009806 GO:0009507|GO:0009523|GO:0015979
Phco6g01001 134 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 134 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01001 Phco-Chr6 9837931 9838577 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01001 6 9837931 9838577 Phco6g01001 6 9837931 9838577 ECH
Phco2g01807 2 48584508 48585168 Phco6g01001 6 9837931 9838577 PCT