Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00986 ATGGATGGTGGAGAAGAAAGAAAGAAAAAAAGAAGGGAGAAGAGAAGCAAGTCTCGTTCGCGGCTGCGCGAATCGCAAGTTGCTTTTAGGTTGGATCTATTCCTCAGATTGTGTTTTCTACTCCCTCACCTTCAACTCTTGTCTCTCGCACCCACAGTTGTCTCTCTCTGTGCTACGAATATTCCCCTCAGTGAAGTCAAATCAATGGCGGGAAAAGGAGCGAAGGGGCTTCTTGCAGCGAAAACCACGGCAGCCAACAAGGACAAAGACAAAGACAAGAAGCGACCTATTTCTCGCTCATCTCGTGCAGGAATCCAGTTTCCTGTGGGTCGTATCCATAGACAGCTAAAACAAAGGGTCCAGGCCAATGGACGTGTTGGAGCTACTGCTGCAGTATACTTGGCCTCAATTCTTGAGTATCTGACTGCTGAGGTTCTTGAACTGGCTGGGAATGCAAGTAAGGATCTTAAGGTGAAGAGGATAACACCAAGGCATTTGCAGCTGGCTATCAGGGGAGATGAGGAACTGGACACCCTTATCAAAGGGACCATTGCTGGTGGTGGTGTCATTCCTCACATTCACAAGTCCTTGATCAACAAAACCGTAAAAGATTAA 615 0.4732 MDGGEERKKKRREKRSKSRSRLRESQVAFRLDLFLRLCFLLPHLQLLSLAPTVVSLCATNIPLSEVKSMAGKGAKGLLAAKTTAANKDKDKDKKRPISRSSRAGIQFPVGRIHRQLKQRVQANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTVKD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00986 204 PANTHER HISTONE H2A 88 200 IPR002119 GO:0000786|GO:0003677|GO:0030527
Phco6g00986 204 MobiDBLite consensus disorder prediction 1 21 - -
Phco6g00986 204 Pfam Core histone H2A/H2B/H3/H4 81 172 IPR007125 GO:0003677
Phco6g00986 204 PRINTS Histone H2A signature 154 168 IPR002119 GO:0000786|GO:0003677|GO:0030527
Phco6g00986 204 PRINTS Histone H2A signature 140 153 IPR002119 GO:0000786|GO:0003677|GO:0030527
Phco6g00986 204 PRINTS Histone H2A signature 95 117 IPR002119 GO:0000786|GO:0003677|GO:0030527
Phco6g00986 204 PRINTS Histone H2A signature 125 140 IPR002119 GO:0000786|GO:0003677|GO:0030527
Phco6g00986 204 PRINTS Histone H2A signature 181 199 IPR002119 GO:0000786|GO:0003677|GO:0030527
Phco6g00986 204 Pfam C-terminus of histone H2A 174 202 IPR032454 -
Phco6g00986 204 SUPERFAMILY Histone-fold 74 181 IPR009072 GO:0046982
Phco6g00986 204 SMART h2a4 84 204 IPR002119 GO:0000786|GO:0003677|GO:0030527
Phco6g00986 204 FunFam Histone H2A 83 204 - -
Phco6g00986 204 CDD H2A 95 200 IPR002119 GO:0000786|GO:0003677|GO:0030527
Phco6g00986 204 Gene3D Histone, subunit A 83 204 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00986 Phco-Chr6 9704285 9705881 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01792 2 48449744 48450808 Phco6g00986 6 9704285 9705881 PCT