Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00916 ATGGGTGCTTCTCAATCAATCTCAGAAAATTCTATTCATGAATTCACTGTCAAGGATGCCAGAGGCAAAGATGTGAACCTGAACGCCTACAGGGGCAAAGTTCTTCTTGTGGTTAATGTTGCTTCAAAATGTGGATTTGCTGATGCCAATTACACCCAGTTAACTCAGCTTTATTCCACATACAAAAGCAGAGGTCTTGAGATATTGGCATTTCCTTGCAACCAATTTTTGAAGAAAGAGCCTGGAACTAGCCAAGAGGCACATGACTTTGCATGTAAAAGATATAAAGCCGAGTATCCCATTTTTGGAAAGGTACGTGTGAATGGATCAGATAGTACACCAGTGTACAAATACCTCAAAGCAAATAAATCTGGGTTTGTGAGTTCTAGAATCAAATGGAATTTCACTAAGTTTCTAGTTGATGAAGAAGGTCATGTCATCAACCGTTATAGCCCAACCACTAAGCCATTAGCCATTGAAAATGACATCAAGAAAGCATTGCGGTTGGATTGA 513 0.3957 MGASQSISENSIHEFTVKDARGKDVNLNAYRGKVLLVVNVASKCGFADANYTQLTQLYSTYKSRGLEILAFPCNQFLKKEPGTSQEAHDFACKRYKAEYPIFGKVRVNGSDSTPVYKYLKANKSGFVSSRIKWNFTKFLVDEEGHVINRYSPTTKPLAIENDIKKALRLD 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00916 170 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Phco6g00916 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Phco6g00916 170 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Phco6g00916 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Phco6g00916 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Phco6g00916 170 Gene3D Glutaredoxin 3 169 - -
Phco6g00916 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Phco6g00916 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Phco6g00916 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Phco6g00916 170 PANTHER GLUTATHIONE PEROXIDASE 6 167 IPR000889 GO:0004602|GO:0006979
Phco6g00916 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Phco6g00916 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Phco6g00916 170 FunFam Glutathione peroxidase 3 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00916 Phco-Chr6 8923864 8927004 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00916 6 8923864 8927004 Phco6g00916 6 8923864 8927004 ECH
Phco2g01715 2 47463139 47465699 Phco6g00916 6 8923864 8927004 PCT