Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00900 ATGATCTCCCCAAGGTCAGACCCTCTTTTGTCACACGCCCGCTTCTCCACCATGCTCAAGCTCCTCAACAAGAACCTCCGCCGCCTCCTCCGCCGACTCCGGTGGCCAATTCGCCGCCGCTCGAAACCCAAAGTAGTAGTGATCAACAAGCTTGAGAAGAACGCCCCAAAGACCCAAACCGAGCCAAGCCCAAACCTTTCCGCGACGGTTCATCCCAACGCACAATTGGGTACTCCGAAGCCAATCCGGGTGGCGACGTTCAACGCGGCGCTGTTCTCCATGGCTCCGGCGCTCCCGAAAGCCGCACGCGAGTTGGGGAAGAAAAACGGCGTCGCTTCGAAGGCGAATTCGCGGCCGAGAAGCATATTGAAGCAGTCACAATCGCAGTCGCAATCAGTGAAAAACACAGCAGAGGAGAGCGTTGGTAGCAGACAGAAGATGAGGGTTTCCATAAATTTGCCAGACAACGAGATTTCGCTGCTGCGAAGCCGACAATCGAGCTTCTCGGAACACGACAAGGATGGGTTGAAGGCGTGGTCGTGGGGGGGAGGTGGGGCCCACGTGAGTAACAGAACGGTGGTTGAGGTTCTGAAGGAAGTGGATGCAGATGTTTTGGGTCTGCAAGATGTGAAGGCTGAGGAAGAGAATGGGATGAAGCCTTTGTCTGATTTGGCTGCGGCGCTGGGAATGAACTACGTCTTCGCCGAAAGCTGGGCACCTGAGTACGGCAATGCTGTCTTGTCCAAATGGCCCATCAAACGCTGCGTCTCTCACCAAATCTTCGATCAAACTGATTTCAGGAATGTTCTGAAGGCCACTATCGATGTGCCTCAAGTAGGTGAACTTAACTTCTACTGTACCCATCTTGATCATCTTGATGAGAATTGGCGAATGAAGCAGGTAAATGCAATAATCCAATCCAGTGATGAGCCTCACATCTTAGCTGGAGGCCTTAATTCACTAGATGAATCGGATTACTCCCAAGAAAGATGGACAGATATTGTGAAGTACTATGAAGAGATGGGAAAGCCAACACCCAAGGTTGAAGTGATGAAATATCTCAAGACTAAAGACTACACTGATGCTAAGGACTATGCAGGGGAATGCGAGTCCGTTGTCATGATTGCCAAGGGACAAAGTGTCCAAGGTACATGTAAGTACGGAACTAGGGTAGATTACATATTGTCATCATCAAATTCTCCATACAAGTTTGTTCCTGGTTCCTATTTAGTTCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTGAGGGAAAATGAGAAGCCTGAAGAAAAGGTGACAAAGAATACGCAACAACCAAGACAGAGAGTTGTAAAAATAACACAATCCACTCCTTCAAAAGGTATCTGGAAAACACACACTTGA 1401 0.4904 MISPRSDPLLSHARFSTMLKLLNKNLRRLLRRLRWPIRRRSKPKVVVINKLEKNAPKTQTEPSPNLSATVHPNAQLGTPKPIRVATFNAALFSMAPALPKAARELGKKNGVASKANSRPRSILKQSQSQSQSVKNTAEESVGSRQKMRVSINLPDNEISLLRSRQSSFSEHDKDGLKAWSWGGGGAHVSNRTVVEVLKEVDADVLGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRCVSHQIFDQTDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQVNAIIQSSDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKTKDYTDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVRENEKPEEKVTKNTQQPRQRVVKITQSTPSKGIWKTHT 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00900 466 MobiDBLite consensus disorder prediction 53 74 - -
Phco6g00900 466 MobiDBLite consensus disorder prediction 109 145 - -
Phco6g00900 466 MobiDBLite consensus disorder prediction 114 145 - -
Phco6g00900 466 MobiDBLite consensus disorder prediction 50 78 - -
Phco6g00900 466 FunFam Endonuclease/exonuclease/phosphatase family protein 178 430 - -
Phco6g00900 466 Pfam Endonuclease/Exonuclease/phosphatase family 189 420 IPR005135 GO:0003824
Phco6g00900 466 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 77 446 - -
Phco6g00900 466 Gene3D Endonuclease/exonuclease/phosphatase 178 430 IPR036691 -
Phco6g00900 466 SUPERFAMILY DNase I-like 176 427 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00900 Phco-Chr6 8750496 8753611 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00900 6 8750496 8753611 Phco6g00900 6 8750496 8753611 ECH
Phco2g01695 2 47310241 47312943 Phco6g00900 6 8750496 8753611 PCT