Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00876 ATGATGGAGAATCAACCGTCACAGTGGTGGTGGCTTGAGAGCCACAGTAACACAAGACGATCCCCTTGGCTTCAATCCACTCTCACGGAGCTAAATGAGAAGACAAAGGCAATGTTAAAACTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACATCGATCATTAGTTGAGCGGTATGATCAAGTCACTGGAATTCGTCAGCAGAAGACTGGAGGATCCCCCTTTTCTCCACTCAAGCATCACCAACCAGAGAAGTTGATGAGTTTTACTGATGAGAGTTATGATAGCTATTCTGAGAGTTGTGATGTGGAGGAGTCTGGGGAATCTGAAATTGACGATCCTGAGCAAGAAGAGGAAGAGGATACAAAATTCGATAACAATGCAGAACTGGAGGAAGTTCAGTTTGTGGCTGCAAATGATGTGATGGAAATTGAGAGACTTGGTGAAGAGAACAAGGATCGTAGCGATCACAACAAGCAGAAATATAACATTTGCGAAGCAGTGATGTTGAGGGTAGAAATAGAGCAACTCAGAAAAGAGAATAGAGTTCAGAAGGATGAACTCAACCGGAAAAGCATCATTAGTGATGAATTAATGATGCTGAGGGAAGAAATAGGACGACTCAGAAAGGAGAACAGAGCGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGCAATGATGTTGAGGGAAGAAATAGAACAACTCGGTAAAGAGAATAGAGTTCTGAAGGATGAAATAAATCAGAAAAGTATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAACAGAGCAACTCAGAAAAGAGAATAGAGAACATAAGGATGAACTCAACCAGAAAGATAACATTTGCGGTGAAATAATGATGCTGAGGGAAGAAATAGAACAATTGGGAAAAGAGAATGGAGCGCTGAAGGATGAACTCAGCCAGAAATATATCATTTGTGGAGAAGTAATGATGTTGAGGGAAGAAATACAACAACTCAGAAAAGAGAATAGAGGACAGAAGGATGAACTCGACCAGAAAGGTATCAATTGTGAAGTAACGATGTTGAGGGAAGAAATTGAAGTATACATAAAAGAGAATAGAGTGCAGAATGATGACCTCAACCCGAAGGGTAACGTTTGTGGTGAAGTAGTGATGTTAAGGGAAGAAATAGAACGACTCAAAAAAGATGAAAGAGCCCAAAAAGGTACCATTTGTGGTGAAGTGATGAAGTTAAGGCAAGAGAATAGCGCACAGAAGGACCATCTCAAGCAAAAAGACCAAGAGAAAATAGAGGTAATAAGACACCTGAGTTTAGCTATAGATATGCTGAAGCAAGAGAATGTAAAGATGAGAAGCTTCATTGCTAAGGAATCTACCAACAAATGGAAGAATCCATTTGGGTTTAAGAATTTCATGGGATCATTATCAGGGCAGTTGTTTAATGGACTTACAAAGAATCAACCTAGTCTTGTAGCTCTCTAG 1548 0.4012 MMENQPSQWWWLESHSNTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLVERYDQVTGIRQQKTGGSPFSPLKHHQPEKLMSFTDESYDSYSESCDVEESGESEIDDPEQEEEEDTKFDNNAELEEVQFVAANDVMEIERLGEENKDRSDHNKQKYNICEAVMLRVEIEQLRKENRVQKDELNRKSIISDELMMLREEIGRLRKENRAQKDELNQKDIICGEAMMLREEIEQLGKENRVLKDEINQKSIICGEVMMLREETEQLRKENREHKDELNQKDNICGEIMMLREEIEQLGKENGALKDELSQKYIICGEVMMLREEIQQLRKENRGQKDELDQKGINCEVTMLREEIEVYIKENRVQNDDLNPKGNVCGEVVMLREEIERLKKDERAQKGTICGEVMKLRQENSAQKDHLKQKDQEKIEVIRHLSLAIDMLKQENVKMRSFIAKESTNKWKNPFGFKNFMGSLSGQLFNGLTKNQPSLVAL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00876 515 Coils Coil 344 371 - -
Phco6g00876 515 Coils Coil 282 333 - -
Phco6g00876 515 Coils Coil 220 240 - -
Phco6g00876 515 Coils Coil 251 271 - -
Phco6g00876 515 Coils Coil 189 213 - -
Phco6g00876 515 PANTHER PROTEIN NETWORKED 4A 2 140 - -
Phco6g00876 515 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 7 88 IPR011684 GO:0003779
Phco6g00876 515 MobiDBLite consensus disorder prediction 119 145 - -
Phco6g00876 515 Pfam KIP1-like protein 9 82 IPR011684 GO:0003779
Phco6g00876 515 Coils Coil 430 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00876 Phco-Chr6 8555570 8557892 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00876 6 8555570 8557892 Phco6g00876 6 8555570 8557892 ECH
Phco2g02324 2 53723498 53726639 Phco6g00876 6 8555570 8557892 PCT