Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00814 ATGATGGTTAGATCCTGTTGGAAACCAATTGCTGATGGTGATGAAGGAGATGGGAGTGGGAGAGTTGATGGACTGCTATGGTACAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTAGTTCAGGCCAATAGTTCATTAGAGGATCGAAGTGAACTTGAATCTGGGCCTTTGACTTCCAACCCCTTGGGTCCTCAAGGGACCTTTATAGGTGTCTATGATGGCCATGGTGGAAGCGAGGCCTCACAGTTTGTCAGTGACAATCTCTTCTGCAATCTCAAAAGGCTTGCAGCTGAACATCAAGGTATGTCAGAACATGTTGTCAAAAGGGCATATTCAGCAACAGAGGAGAGTTTTCTGTCTCTTGTGAAGAAACAGTGGCTGAGTAAGCCTCAGATTGCGTCTGCGGGCACTTGTTGCTTGGTGGGGGTAATTTGCAATGGAATGATATATATTGCAAATTCTGGAGACTCCCGGGTGGTGTTAGGAAGAGTAGAGAGAGCAACAAGGGAAACAGAAGCTATACAATTATCTACAGAACACAATGTTAACCAAGAAACAGTGAGAGATGAACTTCGCTCAAAGCACCCTTTTGATTCACAAATCGTGGTATTGAGACAAAACGTTTGGCGTGTGAAAGGGCTCATACAGGTTTCACGATCCATTGGGGACGCATATCTGAAGAAAGCAGAATTCAACAGGGATCCTCTACCAGCAAAGTATAGGCTAGCAGAAACATTCTTCAGGCCAATTCTTAGTTGTGAGCCATCAACATCATCCCACACACTCCATCCTGATGATCAATTTCTCATATTTGCTTCTGATGGTTTGTGGGAGCATCTTACCAACCAAGAAGCTGTTAACATAGTCAACAGCAACCCACCAAACGGAGTTGCCAGAAGACTTGTGAAAGCTGCACTTAGAGAAGCTGCTAAGAAGTGTGAAATGAGACTTTCTGACCTCCAAAAGATTGAGCAAGGGATGAGGAGGCACATCCATGATGACATAACAGTGATTGTGGTGTTTCTGAATTCCAGAAGTGAGAATACCTCTCTCTGCGGTTCTCCTCTTTCAATCAAGGGAGGTGGGTCTGCCAATTCCTAG 1113 0.4474 MMVRSCWKPIADGDEGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRSELESGPLTSNPLGPQGTFIGVYDGHGGSEASQFVSDNLFCNLKRLAAEHQGMSEHVVKRAYSATEESFLSLVKKQWLSKPQIASAGTCCLVGVICNGMIYIANSGDSRVVLGRVERATRETEAIQLSTEHNVNQETVRDELRSKHPFDSQIVVLRQNVWRVKGLIQVSRSIGDAYLKKAEFNRDPLPAKYRLAETFFRPILSCEPSTSSHTLHPDDQFLIFASDGLWEHLTNQEAVNIVNSNPPNGVARRLVKAALREAAKKCEMRLSDLQKIEQGMRRHIHDDITVIVVFLNSRSENTSLCGSPLSIKGGGSANS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00814 370 PANTHER PROTEIN PHOSPHATASE 30 344 IPR015655 GO:0004722|GO:0006470
Phco6g00814 370 SMART PP2C_4 32 344 IPR001932 -
Phco6g00814 370 ProSiteProfiles PPM-type phosphatase domain profile. 35 346 IPR001932 -
Phco6g00814 370 FunFam Phosphatase 2C family protein 27 355 - -
Phco6g00814 370 SUPERFAMILY PP2C-like 48 348 IPR036457 -
Phco6g00814 370 Gene3D - 29 354 IPR036457 -
Phco6g00814 370 Coils Coil 307 327 - -
Phco6g00814 370 CDD PP2Cc 36 346 IPR001932 -
Phco6g00814 370 Pfam Protein phosphatase 2C 60 315 IPR001932 -
Phco6g00814 370 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00814 Phco-Chr6 8039467 8041212 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00814 6 8039467 8041212 Phco6g00814 6 8039467 8041212 ECH
Phco2g01984 2 50558809 50560674 Phco6g00814 6 8039467 8041212 PCT