Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00796 ATGAAACGCATGGATATCTTCTGTGCATCTCAAGCCTCAACAGCCATATGTCTCAGCATGGATCAAGCCTCATGCTCCTCTTCTTCCAACACCATTCTACTCGGAGGCCGAGTCATTGACCGCCACAACCCCATTATCAATGACTCAAGAAGGAGCACTTCCAAATCTCTCACTGCCCCATGTTCCTCCTCTCACTCACCCATCAACCCTAAGCCTTACCATGAGCTCCACAAGCCCAAGAAAAACTCTTCTTCCAAAACTGCAGCAAAGGGTCTTGAAAATCACAGGAAGAAAAACACATCACAAAACATCACTGAACATGTCACCAACACTTCTAAACCAATTGATAGCATTGTGGATAGGAGTTTGCTTAAGCCAACTTCTGATTTAATCACTCCTCATGGTTCAGCTAGATCTTTGCTCGGTGGCTCCTCCTTATTGGATGCTTCTTTGGTTAATAGAAAAACTTCTCAACTTGGTCATCAAGAGGAAACCATTTCTGCTTCTAAACATTCCAGCTCTTCTCATCAAAACTCCTGTTCCTCAGACCAGGTTGTGGTATTGAGGGTATCTTTGCATTGCAAAGGCTGTGAAGGGAAAGTGAGGAAACACCTCTCCAGAATGCAAGGAGTTAGTTCCTTCAACATAGATTTTGCTGCAAAGAAGGTGACGGTTGTTGGGGATGTGACTCCATTGAGTGTCTTGGCTAGCATATCAAAGGTGAAGAATGCACAATTATGGGCACCAGCAACTGCATCAGCAGTGGGATCCGCCACTGTAGAAGCAAAGAAGTAA 795 0.4465 MKRMDIFCASQASTAICLSMDQASCSSSSNTILLGGRVIDRHNPIINDSRRSTSKSLTAPCSSSHSPINPKPYHELHKPKKNSSSKTAAKGLENHRKKNTSQNITEHVTNTSKPIDSIVDRSLLKPTSDLITPHGSARSLLGGSSLLDASLVNRKTSQLGHQEETISASKHSSSSHQNSCSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQLWAPATASAVGSATVEAKK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00796 264 CDD HMA 187 240 IPR006121 GO:0046872
Phco6g00796 264 Pfam Heavy-metal-associated domain 188 240 IPR006121 GO:0046872
Phco6g00796 264 Gene3D - 181 245 - -
Phco6g00796 264 ProSiteProfiles Heavy-metal-associated domain profile. 183 249 IPR006121 GO:0046872
Phco6g00796 264 PANTHER OS08G0405700 PROTEIN 4 254 IPR044526 -
Phco6g00796 264 MobiDBLite consensus disorder prediction 49 69 - -
Phco6g00796 264 MobiDBLite consensus disorder prediction 158 179 - -
Phco6g00796 264 SUPERFAMILY HMA, heavy metal-associated domain 184 241 IPR036163 GO:0046872
Phco6g00796 264 MobiDBLite consensus disorder prediction 44 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00796 Phco-Chr6 7881563 7882770 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00796 6 7881563 7882770 Phco6g00796 6 7881563 7882770 ECH
Phco2g01967 2 50371028 50372660 Phco6g00796 6 7881563 7882770 PCT