Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco6g00795 | ATGGAGAAATTCCGGAACTCCAATCACCAACCTCCTCTTCCTCAAGCTCCGGGGAACAAACAGGTTCGTAGACAGCGACTACCACCGAATCTGTCACCTGATTCTTGTTCAGAAGGTGGTGTGGTTGCAGACAAGGATTCGTTCTCTTTCAAATTTGGCTGGAGATCTTCAAAACAACTGCTTGGAACTCCGATTAAGAAGTTATTAGACGAAGAGATGTCACCCAAATCTGACTCAAAAAGAAGATCCCCTGGAGTCATCGCCAGATTGATGGGTCTTGATGGACTGCCATTTCAGCAGCCTATTAGTAAGCAGCATAAGGGTTTGTCTGAAAACCACCAGAAGACACCACAATTACAGAAAACACGCGGCAAAGGAGTGCCATATGATGGTGGATCATCTAGGAGAGGCTTAAGGGATCAGCAAGAATTTAAGGATGTATTTGAGGTCTCAGAAATTCCAAAGGTAGAGAGCAGTAGATATCCATCACCGGGGTGTGTAGACTTGAAGGCCAATGATGCTGAGATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTCATCAAGATTTACAGTCTTCAAAGGACTTCCGAGACACACTTGAGGTTTTGGATTCTAACAAGGATCTCCTGCTGAAATACTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAATGATCTCCAAGCTGATCCTGTCCAATCACATTATGGTAATCTAGAAACTATGGATATTGAGAAGTATGAACATGACTTAAGTTGGAGGTCAGATAGGGAGAAAACACGGTTGAACTACAATAGATCTCATGAAAATCATCTAGATGGCTATCCTTGTCATTTTGACAAAAGACATGTGATGCATAGTTCACCAAAATCATCAAAGCTTCAATTTCAGGGCAGACATGAGCAAGATGCAGTCCCCACAAAGATTGTTCTCCTGAAACCCAATCTTGGAAAAGTTCAGAATGGTACCAGAATTGTATCATCACCTTGTTCTCATAATTTTCTGTCAGGCCATGAAAAGGACACTGAACTGTGTCAAGTGACAAATTTGCCCGAAAGTGCAAGGTCTTGGAGGCAAGATTCTTTTGAATCTAGAGAAATTGCAAAGGAAATCACTAGGCAAATGAGAAATAGTCTTAACAATAGCGGCATGATGCTTTCAACTTCTAGAATTGCAGGATATGCAGGGGATGATAGTTCATGTAGTTTTTCTGGTAATGAATCTCCTGACGTGTCTGGGGAAATAACTGCAATTATGGGAAATTCGTTCGACTTAAACAACCGTAGTAGGCGATCTCCCCATTCTGGTGAATCTTCTGTCAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGACACACAAGTCTCAAGAGCTGCAAGGCATCAGTAGGAGCAGCACGCTGGCAGAAATGCTTGCTATCCCTGACAAAGAATTGAAGGCTACAAATTTTGCCGGCATGGCTACTGGGGAAGGTTTCCGTGATAAGTTTACTCCCAGTAGTGAACCTGCTAAATGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGCTGCATTGGTAGTTTGTCAAGGTCAAAATCCCTTCCTTCTTCCTCCACTGCCTTTGGAAGTCCTAGAACATTCTTGCGCACTGAAGCACTTCGTGCTGATCGATTTGTGGTGCCGAAGGAAGCCTATAAACGGGATAGAAGAAGAGCAGCAAAGAATTTTGATCATAGACATGGTGTGAATAACAGAAACTCAAGATCTGGTCACAAGAAGTCTTGGTCTTTGCATTCGTCAAAGCTAGAAGTTGACGAGTTTTGTGCTGACTCGCCTACAGTTCAGAATAAAATGAATATCATTCTTGAAGATTCGCCCAAGCTTGAAGTTCCAAGTGCAGTTGCTGATGAGGACATGGAGGTGACAAATGGAAAAGTTGAGTCTTCTGAACCTTTGAATAAGGTGCTTCCTGAATTATCTTCTCATGTTTTGATAGAAGGCGATGGTGGCGCGGTTGACAAAGACAATTCAATACAGCAGGATCTATCCGCTGCGTCGCCTGGTGTAAGTTCAGTCAACCATGAAACACCTGCTCCTGGACTTGAATCTTCTTGCTGTAAAGATGCTGATCAACCCAGCCCTGTCTCCATCCTAGAACCTGCTTTTACAGATGATCTGTCTTCTTGTTCTGAATGTTTTGAAAGTCTCAATGCTGATCTACAAGGGCTGCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGATTATGTGGAGGGACCCATGACAGTAAGTGATGAAGATGGTGAGGAAGTATCTCCTGGAATGTTAGCAGCAGACAAAGGATTATGTCCAAGAACTGAAGATAGCTGGGAGTGTTCCTACATTATTGATGTCTTGTCCGAATCTGGCATTGATGGAGTTCATCTCGATACAATTTTGGAAGTTTGGCATTCCCTAGAATGCCCTGTTAATCTTTCGGTGTTTGATGAACTTGAAGAAAGGTATAGTGACGGGACAGCTTGTTCAAGGTCTCAAAGGAGATTACTTTTTGACCATATAAATATAGGAATTCTGAAGATCGGTGAGCAATTCTCTTTCTCTAGATCAGCAATCAGAAATGCCATTGGTTCTAATTTGACCAAAAAGGGGTTCCGAGATGGGCTTCTGAGGATGCTAGTGGACGAAGCAAAAGTAAGGGATGGTGGTCAGGGGAGTGTGGTGGTTGGGGAATCTGAGTGGATGGACCTGAAAGTTTACGTTGATGCAATAGCCAGGGAAGTTGAGAGATCGTTGTTAGATGATTTAGTGGCAGAGTTAATCGGTACCTAG | 2850 | 0.4309 | MEKFRNSNHQPPLPQAPGNKQVRRQRLPPNLSPDSCSEGGVVADKDSFSFKFGWRSSKQLLGTPIKKLLDEEMSPKSDSKRRSPGVIARLMGLDGLPFQQPISKQHKGLSENHQKTPQLQKTRGKGVPYDGGSSRRGLRDQQEFKDVFEVSEIPKVESSRYPSPGCVDLKANDAEMSFIEQKFMDAKRLATHQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQADPVQSHYGNLETMDIEKYEHDLSWRSDREKTRLNYNRSHENHLDGYPCHFDKRHVMHSSPKSSKLQFQGRHEQDAVPTKIVLLKPNLGKVQNGTRIVSSPCSHNFLSGHEKDTELCQVTNLPESARSWRQDSFESREIAKEITRQMRNSLNNSGMMLSTSRIAGYAGDDSSCSFSGNESPDVSGEITAIMGNSFDLNNRSRRSPHSGESSVSREAKKRLSERWKMTHKSQELQGISRSSTLAEMLAIPDKELKATNFAGMATGEGFRDKFTPSSEPAKWVEPLGISSRDGWKDGCIGSLSRSKSLPSSSTAFGSPRTFLRTEALRADRFVVPKEAYKRDRRRAAKNFDHRHGVNNRNSRSGHKKSWSLHSSKLEVDEFCADSPTVQNKMNIILEDSPKLEVPSAVADEDMEVTNGKVESSEPLNKVLPELSSHVLIEGDGGAVDKDNSIQQDLSAASPGVSSVNHETPAPGLESSCCKDADQPSPVSILEPAFTDDLSSCSECFESLNADLQGLRMQLQLLKLESEDYVEGPMTVSDEDGEEVSPGMLAADKGLCPRTEDSWECSYIIDVLSESGIDGVHLDTILEVWHSLECPVNLSVFDELEERYSDGTACSRSQRRLLFDHINIGILKIGEQFSFSRSAIRNAIGSNLTKKGFRDGLLRMLVDEAKVRDGGQGSVVVGESEWMDLKVYVDAIAREVERSLLDDLVAELIGT | 949 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco6g00795 | 949 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
| Phco6g00795 | 949 | MobiDBLite | consensus disorder prediction | 98 | 137 | - | - | |
| Phco6g00795 | 949 | Pfam | Domain of unknown function (DUF4378) | 799 | 945 | IPR025486 | - | |
| Phco6g00795 | 949 | MobiDBLite | consensus disorder prediction | 428 | 466 | - | - | |
| Phco6g00795 | 949 | Pfam | Protein of unknown function (DUF3741) | 180 | 224 | IPR022212 | - | |
| Phco6g00795 | 949 | Coils | Coil | 739 | 759 | - | - | |
| Phco6g00795 | 949 | MobiDBLite | consensus disorder prediction | 690 | 713 | - | - | |
| Phco6g00795 | 949 | Pfam | DUF761-associated sequence motif | 77 | 97 | IPR032795 | - | |
| Phco6g00795 | 949 | MobiDBLite | consensus disorder prediction | 690 | 704 | - | - | |
| Phco6g00795 | 949 | MobiDBLite | consensus disorder prediction | 103 | 121 | - | - | |
| Phco6g00795 | 949 | PANTHER | AFADIN | 25 | 947 | - | - | |
| Phco6g00795 | 949 | MobiDBLite | consensus disorder prediction | 441 | 463 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco6g00795 | Phco-Chr6 | 7858940 | 7863702 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco6g00795 | 6 | 7858940 | 7863702 | Phco6g00795 | 6 | 7858940 | 7863702 | ECH | |
| Phco2g01966 | 2 | 50361404 | 50366915 | Phco6g00795 | 6 | 7858940 | 7863702 | PCT |