Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00788 ATGACAAGGAATTTGAAGAAGATATCCAAGTCTTCATGGCCAAATTTTAATGTGAGGAAGTGGCTCAATAAAAGGAGCAACGATGATAGCTTTCCCTCAGATTACTCTTTACCAGAGGGGTGGCAGATGGATTCCACAAATGAATTGAAACATTCCGCATCAGTGCAGGAGACTCCAGTTGTCAGTGACATCGACACGCTCAACCTTAGGATGTTCGTGGGGACGTGGAATGTGGGAGGGAAGTCACCCAACGAAGGATTGAACTTGAGGAATTGGTTGATGTTGCCTTCACCAGCTGATATCTATGTCATTGGGTTCCAAGAAATTATACCTCTAAACCCAGGGAACGTGCTTGGGCCAGAGGATAGTGGCCCAGCAACAAAGTGGCTCACTCTGATTCGTGAAGCCTTGAACTCTAACACAAGCTCCAGCGAAGAAAGTTCTCCTACATTATGTAGCTCAAGTGAACAAGAACAAGAACATTATTATTGCCTTGCAGCAAGTAAACAAATGGTGGGTATCTTCTTGTGTGTGTGGGTACGTGAGGATCTTTACAAGCATGTCACCAATTTAAAAGTGTCTTCCGTTGGTAGAGGCATCATGGGCTATCTAGGAAATAAGGGTTCAGTATCAATCAGCATGACATTGTACCACACGACGTTTTGCTTGGTTAGTACCCACTTGGCCTCTGGAGAGAAGGAGGGTGACGAGATACGAAGAAATTTGGACGTATCAGAGATCCTAAAGAAAACTAAATTTTCTCACTCGTTCAAAGCTCTTGGTCAACCACTCCCTCCAGAAAGCATATTAGAGCATGATAAGATTATTTGGCTTGGGGATTTGAATTATCGCCTTGCTGCTGGTTATGATGATACACTTGAATTACTGAAAAAGAATGATTGGCAGGCTCTGTTAGAGAAGGATCAGCTAAGGATAGAGCAAAGAGCTGGTAGAGTGTTCAAAGAGTGGAAGGAAGGGAAGATATACTTTGCCCCAACTTACAAATACTTATTTGATTCTGACCAGTATGTTGCTCAAACCAACAAGTCCAAGGAAAAACGACGAACACCGGCTTGGTGCGATCGAATTCTGTGGAAAGGAGAAGGCGTGGAGCAGTTATGGTACGTGAGAGGAGAGTCCAAATTCTCAGACCACAGACCAGTGTATTCACTATTCTCGGTTCATGTGGACAAGAAATGTACGAAGCTAAGTTCCTCTATTGCTCCATCAGAGAGTAGCTCAATCTCAATGTCAAGGTCATGCTCCTCCAGAAACTTGACAAACGCTGGCTTGTCCTCGTCTTGCTTTGCTAAAGTTCAGGCAGAAGAACAACTATTGTTACTAACGAGGGAACATAAACACCGCACCTGCAGGGTTCTGAGTTAG 1386 0.4394 MTRNLKKISKSSWPNFNVRKWLNKRSNDDSFPSDYSLPEGWQMDSTNELKHSASVQETPVVSDIDTLNLRMFVGTWNVGGKSPNEGLNLRNWLMLPSPADIYVIGFQEIIPLNPGNVLGPEDSGPATKWLTLIREALNSNTSSSEESSPTLCSSSEQEQEHYYCLAASKQMVGIFLCVWVREDLYKHVTNLKVSSVGRGIMGYLGNKGSVSISMTLYHTTFCLVSTHLASGEKEGDEIRRNLDVSEILKKTKFSHSFKALGQPLPPESILEHDKIIWLGDLNYRLAAGYDDTLELLKKNDWQALLEKDQLRIEQRAGRVFKEWKEGKIYFAPTYKYLFDSDQYVAQTNKSKEKRRTPAWCDRILWKGEGVEQLWYVRGESKFSDHRPVYSLFSVHVDKKCTKLSSSIAPSESSSISMSRSCSSRNLTNAGLSSSCFAKVQAEEQLLLLTREHKHRTCRVLS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00788 461 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 19 408 IPR045849 GO:0004445
Phco6g00788 461 SMART i5p_5 67 401 IPR000300 GO:0016791|GO:0046856
Phco6g00788 461 Gene3D Endonuclease/exonuclease/phosphatase 52 419 IPR036691 -
Phco6g00788 461 Pfam Endonuclease/Exonuclease/phosphatase family 74 385 IPR005135 GO:0003824
Phco6g00788 461 SUPERFAMILY DNase I-like 66 397 IPR036691 -
Phco6g00788 461 FunFam Type I inositol polyphosphate 5-phosphatase 8 50 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00788 Phco-Chr6 7776989 7781171 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00788 6 7776989 7781171 Phco6g00788 6 7776989 7781171 ECH
Phco2g01959 2 50274766 50278330 Phco6g00788 6 7776989 7781171 PCT