Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00702 ATGAATCATCAAAGCAGGTGCAGAGTTTTTCTTCCAAATCTGATAATACTTGCAATCATCGTACTCCATTCAACAACATGGACTGGTGCACAGGAAGTTGAGGATGAGAGTGAGTTTGATTACTTAAAAGAGAGTGAGAAGGGTCCCTCACACTGGGGAGAACTGAAGAAGGAATGGGAAACATGTAAAAGTGGGAAAATGCAGTCTCCAATTGATTTGTCAAGCCACAGGGTGAAAGTGGTGCCAAAGTTGGGGGAGCTAAAGAAGCACTACAAGCCCCAGAATGCCACTGTCAAGAACAGAGGCCATGATATTGAGCTGAAATGGGGAGAAGATGCTGGATCAATGAACATCAACGGGACGGAATTTTTTCTGCGTCAGTGCCATTGGCACTCACCTTCAGAACATACCATCAATGGAAGGAGGTATGATTTGGAGCTCCACATGGTTCATGAAAGCAAAAGCAAAAATGGGAAAGCAAAGATTGGTGTTGTTGGAGTTCTGTTCAAGATTGGTCGACCCGATCCTATTCTCAGCAAGTTGTCAAAGATCATAAAAAGCATGGGTGAGAATGAAGTAGAAAAGAAAATTGGGGTGTTTGATCCCTCAGAAATAAAGTTGGGTGGGAAGAAGTACTACAGGTACATTGGCTCCCTCACTGTCCCTCCTTGCACTGAAGGTGTCATTTGGACTATCAATAAAAAGATAAAAAGTGTGTCGAGGGCACAAGTGAATTTACTTAGAGAGGCTGTCCACGATCATGCAGAGAAGAATTTCAGACCTAGACAAGCCCTGAATAAACGAGGGATACAACTCTATGGACCAAAACGCAAGGAATAA 840 0.4321 MNHQSRCRVFLPNLIILAIIVLHSTTWTGAQEVEDESEFDYLKESEKGPSHWGELKKEWETCKSGKMQSPIDLSSHRVKVVPKLGELKKHYKPQNATVKNRGHDIELKWGEDAGSMNINGTEFFLRQCHWHSPSEHTINGRRYDLELHMVHESKSKNGKAKIGVVGVLFKIGRPDPILSKLSKIIKSMGENEVEKKIGVFDPSEIKLGGKKYYRYIGSLTVPPCTEGVIWTINKKIKSVSRAQVNLLREAVHDHAEKNFRPRQALNKRGIQLYGPKRKE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00702 279 Gene3D Alpha carbonic anhydrase 35 278 IPR036398 -
Phco6g00702 279 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
Phco6g00702 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 274 IPR001148 -
Phco6g00702 279 SMART Carb_anhydrase_2a 41 274 IPR001148 -
Phco6g00702 279 SUPERFAMILY Carbonic anhydrase 38 270 IPR036398 -
Phco6g00702 279 CDD alpha_CA_prokaryotic_like 48 272 IPR041891 -
Phco6g00702 279 PANTHER CARBONIC ANHYDRASE 36 268 IPR023561 GO:0004089|GO:0008270
Phco6g00702 279 Pfam Eukaryotic-type carbonic anhydrase 48 271 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00702 Phco-Chr6 7003656 7006383 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02070 2 51455261 51457324 Phco6g00702 6 7003656 7006383 PCT