Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00601 ATGGGGGCCGAAGCGGTGAATAGGACATGGCTTAGTGCTCTGTTGCCAGTCTCACGCAAGACTGCATCAGATGGCAAGGAAGTGATTGGGATTTTGGCGTTTGAAGTTGCTGGTTTGATGTCTAAGGTGGTTAGTTTATGGCGTTCTTTGAGTGGCAGGGAGATAATGATTACGAAGGAATGGATAGTGAAATCGGTTGGGGTCAAAATGCTAGTGTCTGATGATGACAATTTCTTGATGGAACTGGCATTGAGTGAGATACTCAGTAACTTTGAGTCCCTAGCTTGGTCTGTGGCCAGGTTGAGTAGAAGGTGCAAGGATGCAGTGTATCATGGGTATGAACATTTTGTTCACAATCCTGCTCAACATCATGTTGAATGGTCTGGGTGGGAATATGCATGGAAAAAGATGGAGAGGAAGGTGAAGAAAATGGATAGATTTGTTGCTGCTATGTCACTACTGTCCCAAGAGCTTGAGGTACTGGCTGAGAGAGAACAGACTTTCAGGAGAATGAAGGCGAATCGCCTGCTTCATGGGGTGAAATTGCTTGAGTTTCACAAGAAGGTCATGTGGCAGCGCCAGCAAGTGAAAACTCTGAGAGACATGTCTCCGTGGAACAGAAGTCATGACTACGTGGTCCGGTTATTGGCAAGATCGTTGTTCACAATTCTTGAGAGAATCATACTTGTCTTTGGAAATAGTCATATACCTATTGAAAACCAGGAAAATGAATCCCTTTCTCCCTCCGTAAATACCAATAGCAATCATCTTACTCGCAGTCATTCCTTCTCTACTCTTATGCATTCTTCTAAGACTAATTCACGTGGATTCGGTTCACAACGTTTTGAGAGCAAGCAAGAGTTTGTGGTGGACAAAAGCAAGATCAAGATCAAGAGAAAGAAGAAAAAGCAACAAGTGCTTCTTTCAGAAAGCAAGCAATTAAAAAATATTGGGCCATTCATAGGTTGCATGTCAGTTGGAAATAACTCTCCTGTGGCACAGACTTGTATGCCAACTAAGGGTAGTTCTATGAGGTTGGTTGATTGTCATGTGAAGAGTATTGAGAAGACAGTGGATAAAAAATCTCTGATATGCAGAAGTAGAATTTATTTTAAACTATCTGTGAAGGATCGGTTAAAGCCAGGTGAATCTACTCTTGGTGGTGCTGCTTTAGCTCTACATTATGCAAATGTGATTGTACTGATAGAGAAGATGGTGTCAGCACCTCACCTCATTGATCTTGAAACAAGAGATGATTTGTATTACATGTTACCAACTGCTATAAGAACCGGTCTGAGGGGAAAGCTGAAGTGGTATACAAAGAGCACTCGTGCCGGTGTCCATGAAGCTAGTCTTGCAGTGGAATGGAGTTTGGTACTCTCACAGATATTGGAATGGTTGGCTCCTCTGGCACACAACATGATAAAGTGGCATTCTGAGAGGAATTTTGAGAGGGAGCAATCTGCTTGCAAAGCAAATATTTTGCTTGTCCAAACTCTTTACTTTGCAAACCAAGCAAAAGCTGAAGCTGCAATGGTTGAACTCCTTGTTGGTCTTCATTATGTGTGCTGGATTAATAGAGAGGCACAGGAATTTGTAGGGTCTAGAAATTTTAATGGTGTTCGTTTAAGAAAGAATGAGTTGTACGATAAAAGTTTTTAG 1662 0.42 MGAEAVNRTWLSALLPVSRKTASDGKEVIGILAFEVAGLMSKVVSLWRSLSGREIMITKEWIVKSVGVKMLVSDDDNFLMELALSEILSNFESLAWSVARLSRRCKDAVYHGYEHFVHNPAQHHVEWSGWEYAWKKMERKVKKMDRFVAAMSLLSQELEVLAEREQTFRRMKANRLLHGVKLLEFHKKVMWQRQQVKTLRDMSPWNRSHDYVVRLLARSLFTILERIILVFGNSHIPIENQENESLSPSVNTNSNHLTRSHSFSTLMHSSKTNSRGFGSQRFESKQEFVVDKSKIKIKRKKKKQQVLLSESKQLKNIGPFIGCMSVGNNSPVAQTCMPTKGSSMRLVDCHVKSIEKTVDKKSLICRSRIYFKLSVKDRLKPGESTLGGAALALHYANVIVLIEKMVSAPHLIDLETRDDLYYMLPTAIRTGLRGKLKWYTKSTRAGVHEASLAVEWSLVLSQILEWLAPLAHNMIKWHSERNFEREQSACKANILLVQTLYFANQAKAEAAMVELLVGLHYVCWINREAQEFVGSRNFNGVRLRKNELYDKSF 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00601 553 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Phco6g00601 553 PANTHER BNAC09G50660D PROTEIN 21 531 - -
Phco6g00601 553 Pfam Protein of unknown function (DUF668) 385 476 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00601 Phco-Chr6 5893745 5895406 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00601 6 5893745 5895406 Phco6g00601 6 5893745 5895406 ECH
Phco2g02123 2 52004507 52006222 Phco6g00601 6 5893745 5895406 PCT