Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00593 ATGGGCGCGTCGCTGTCGAGCCCCGGCGCGAACGGTTCGACAATGGGTCCGGGCCTCGGCGACATTCCGGAGAGTTGCGTGGCGTGCGTGTTCCTCTACCTCACGCCGCCGGAGATTTGTAACCTCGCTCGCCTCAACCGCGCGTTCCGAGGCGCCGCCTCCTCGGACTCAGTCTGGGAGGCCAAGCTGCCGCGCAACTACCAGGATCTGCTGGATCTGGTCCCGCCAGAGCGCCACGGGAATCTCTCGAAGAAGGACATTTTCGCGCTCCTCTCACGACCCCTGCCCTTCGACCACGGTCACAAGGTGGGTGGTGCTCTCCAGGAAGTGTGGCTGGACAGAGTCACGGGAAGGGTTTGCATGTCGCTTTCGGCGAGGGCGATGGCGATTACTGGAATTGATGACCGGAGATACTGGAGTTGGATTCCTACTGAAGAATCTAGGTTTCACACGGTGGCTTATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGAGAGGTGACGTTTCCATTTCCCGCTGATATTTATACTCTGTCCTTTAGGCTTCACCTTGGACGGTTTTCCAAAAGACTTGGACGGCGTGTTTGTAATTATGAACACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTGTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTTTGGATGAAAGTGAGATTGATGATACATATGGAAATCATAAGCGTGGATACTGGATAGATTATAAGGTGGGTGAGTTTATTGTCAGTGGATCAGAGCCTACAACTCATGTTAGATTTTCCATGAAACAAATTGATTGTACACATTCCAAAGGTGGCCTTTGTGTAGATTCTGTATTTATTATACCAAGTGATTTGAGAGAACGCAAGAGAAAATGCATTTGA 900 0.5044 MGASLSSPGANGSTMGPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASSDSVWEAKLPRNYQDLLDLVPPERHGNLSKKDIFALLSRPLPFDHGHKVGGALQEVWLDRVTGRVCMSLSARAMAITGIDDRRYWSWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASCECCLDESEIDDTYGNHKRGYWIDYKVGEFIVSGSEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRERKRKCI 299
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00593 299 SMART fbox_2 22 62 IPR001810 GO:0005515
Phco6g00593 299 SUPERFAMILY F-box domain 15 89 IPR036047 GO:0005515
Phco6g00593 299 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Phco6g00593 299 PANTHER F-BOX PROTEIN PP2-A15 10 296 - -
Phco6g00593 299 CDD F-box_AtSKIP3-like 19 64 - -
Phco6g00593 299 Pfam Phloem protein 2 119 288 IPR025886 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco6g00593 Phco-Chr6 5841275 5843396 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00593 6 5841275 5843396 Phco6g00593 6 5841275 5843396 ECH
Phco2g02118 2 51954586 51962104 Phco6g00593 6 5841275 5843396 PCT