Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00588 ATGGCATCGGGGCAACACGAGGATCGAGCTGAGGCAGCTTCGAAACTTGCTGCCAAAGAGCTTGAACAAGCCAACAGAGAGAGAGATCGTGATGATGTGGGCGTTGTGGACCAACAAAACAATGAAGAAAAGCGTGGTGTGATAGGATCCATGTTGAGGGCGGTGCAAGAAGCGGTGGTTGGGAAGAAAGAATCAGTTCCTGCGAAATCATACACCACAGAGGTGATTCATGATGTTAATATCAAACCTGATGACGTGCCAACCGGGGAAGTGAGAGACATATCCGCCGCCAAGTCGCCTGGGATCTACGATTCTTCTGCCACGGACGAAACCGGTTCCAAGGTTGGTGAATATGCAGATTATGCTTCTCAGAAGGCGAAGGAAACAAAGGATGCGGCAAAGGCAAAAGCTGGGGACTACACAAATTATGCTTCTCAGAAGGCGAAGGAAGCGAAGGACAAGACTCTGGAGAAGGGTGGGGAGTATAAAGACTATGCTGCTGAGAAGGCTAAGGAAGGAAAAGATGCTACGGTGAATAAGATGGGAGAGTACAAGGATTACGCTGCGGAGAAGACGAAAGAAGGGAAAGACAGTGCTATCGAGAAGCTTGGAGAGCTGAAAGATTCTGCTGCGGATGCTGCTAAGAAAGCTGTGGAATACTTGAGCGGCAAGACAGAGGAAACCAAAGAGAAGCTCTCGGAATCCGCAGAGGTTGCCAAGAACAAGGCAGCGGCGACGGCAGAGACGGCGAAGGATAGAGCGGCGGAGATGAAAGATGCGGCGAAGGACAAGGCTGCTGAAGCTGCGGATGCAACAAAGAACAAGACTGCTGAGACGACTGAGGCAGCAAAGAATAAGGGTAGGGAGATGAAGGACAAGGCCGCAGAAACTGCGGATGCAACAAAGAACAAGACTGCTGAGACGACTGAGGCAGCAAAGAAGAAGGGTAGGGAGATGAAGGACAAGGCCGCAGAAACTGCGGATGCAACAAAGAACAAGACTGCTGAAACGACTGAGGCAGCGAAGAATAAGGCTGCGGAGATGAAGGACAAGACCTGGGAAGCAACTGAGGCAGCAAAGAACAAGACCTGGGAAGCAACAGAGGCAGCAAAGAACAAGACTGCGGAGATGAAGGACAAGGCTGCAGAAACTACAGAAGCAGCAAAACAGAAAACTGCACAGGCAAGGGACAAAACCGAGTTCTTACTCTTACTTTTAAATTTGTTAAGCCTAACATGTCTTAGAATCTCTTCAAGTTTTTATGTAGAGAATTTGAGAAGTGCAGATGAAGATGCAAGGAGGAAAATGGAGGATCTAAGGCTACAAGATAAAGGGTTCAAAGATATTACTGAGGGGCGTGGAGATAAGGTGGTGATGAAAGTGGAAGAGAGTCGACCAGGGGCAATAGCGGATACACTGAAAGCCGCTGATCAGAATGCGGCACAGACCTTCAACGATGTGGGGCGCTTCCATGAAGAGGAGATCGTAAAAAAGAAATAA 1500 0.4887 MASGQHEDRAEAASKLAAKELEQANRERDRDDVGVVDQQNNEEKRGVIGSMLRAVQEAVVGKKESVPAKSYTTEVIHDVNIKPDDVPTGEVRDISAAKSPGIYDSSATDETGSKVGEYADYASQKAKETKDAAKAKAGDYTNYASQKAKEAKDKTLEKGGEYKDYAAEKAKEGKDATVNKMGEYKDYAAEKTKEGKDSAIEKLGELKDSAADAAKKAVEYLSGKTEETKEKLSESAEVAKNKAAATAETAKDRAAEMKDAAKDKAAEAADATKNKTAETTEAAKNKGREMKDKAAETADATKNKTAETTEAAKKKGREMKDKAAETADATKNKTAETTEAAKNKAAEMKDKTWEATEAAKNKTWEATEAAKNKTAEMKDKAAETTEAAKQKTAQARDKTEFLLLLLNLLSLTCLRISSSFYVENLRSADEDARRKMEDLRLQDKGFKDITEGRGDKVVMKVEESRPGAIADTLKAADQNAAQTFNDVGRFHEEEIVKKK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00588 499 MobiDBLite consensus disorder prediction 364 391 - -
Phco6g00588 499 MobiDBLite consensus disorder prediction 277 300 - -
Phco6g00588 499 MobiDBLite consensus disorder prediction 306 329 - -
Phco6g00588 499 MobiDBLite consensus disorder prediction 1 39 - -
Phco6g00588 499 MobiDBLite consensus disorder prediction 335 358 - -
Phco6g00588 499 Coils Coil 422 442 - -
Phco6g00588 499 Gene3D - 139 194 - -
Phco6g00588 499 MobiDBLite consensus disorder prediction 223 391 - -
Phco6g00588 499 Coils Coil 7 27 - -
Phco6g00588 499 MobiDBLite consensus disorder prediction 81 116 - -
Phco6g00588 499 MobiDBLite consensus disorder prediction 1 43 - -
Phco6g00588 499 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 30 250 - -
Phco6g00588 499 MobiDBLite consensus disorder prediction 246 271 - -
Phco6g00588 499 Coils Coil 240 274 - -
Phco6g00588 499 MobiDBLite consensus disorder prediction 223 237 - -
Phco6g00588 499 Pfam Late embryogenesis abundant protein 258 298 IPR004238 -
Phco6g00588 499 Pfam Late embryogenesis abundant protein 141 184 IPR004238 -
Phco6g00588 499 Pfam Late embryogenesis abundant protein 171 206 IPR004238 -
Phco6g00588 499 Pfam Late embryogenesis abundant protein 107 140 IPR004238 -
Phco6g00588 499 Pfam Late embryogenesis abundant protein 185 224 IPR004238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00588 Phco-Chr6 5799690 5801463 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02115 2 51933402 51934404 Phco6g00588 6 5799690 5801463 PCT