Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00455 ATGCATGACATTTGTCTCAACATGCCACCAATGGTTCAGAACTTCGACCCTGAGGACCTCTTCTCAAGGCGTTGCATTTGGGTGAATGGACCTGTGATAGTTGGTGCTGGTCCTTCAGGTCTTGCTGTGGCTGCAGGCCTCAAAGACCAAGGTGTTCCATTCATAATCCTTGAGAGAGCAAACTGCATTGCCTCTCTTTGGCAAAACCGCACCTATGATCGCCTCAAGCTTCACCTCCCCAAACAGTTCTGCCAGCTTCCAAACTTCCCTTTCCCTGAAGACTTCCCTGAGTACCCCACAAAGTTTCAGTTCATAAGCTACCTTGAGTTATATGCCAAGCACTTCAACATAGCCCCACAGTTCAATGAAACAGTGCAGTCTGCAAAGTATGATGAGACCTTTGGCCTGTGGAGGGTCAAGACCATCAGGAGGAAAGGACCCTCCTCAGGTGCTGAGTGTGAGGTTGAGTACATTTGCAGGTGGCTTGTGGTTGCCACTGGTGAAAACTCAGAGAAAGTGGTGCCTGAGTTTGAAGGGTTGGGAGAGTTTGGTGGCCATGTCACGCATGCTTGTGAATATAAATCTGGGGAGGGTTTTGGTGGACAGAAAGTGCTTGTTGTTGGGTGTGGCAACTCAGGCATGGAAGTCTCACTTGATCTATGTAACCACAATGCAAAACCATCGATGGTGGTTAGAAGCTCAGTTCATGTTTTACCAAGAGAGATTTTTGGGAAATCTACTTTTGAAGTTGCTGTGATGTTGATGAAGAGGCTACCTCTTTGGATGGTTGATAAGATATTGCTGATTCTGGCACGTTTGACTTTGGGGAATGTTGAAAAGTATGGTCTCAAAAGGCCTTCAGTGGGTCCTTTGGAATTCAAGCACACTGCAGGGAAGACCCCTGTGCTGGATATTGGGGCCCTTGAGAAAATTAGATCTGGTAAAATCAAAGTGGTTCCTGGAATCAGAAGGTTCTTGCCAGGGAAAGTGGAACTTGTTGATGGCCAAGTTCTTCAGATTGATTCTGTGGTTCTTGCCACTGGTTATCACAGCAATGTACCATTATGGTTGAAGGAAAATGAGTTCTTTTCCAATGATGGGATTCCAAGAAACCCCTTTCCAAATGGGTGGAAAGGCAAAGGTGGTCTTTATGCTGTTGGATTCACAAGGAGAGGCCTTTCTGGTGCTTCTTTGGATGCAATCAATGTGGCTCATGACATTGCCAAGAGTTGGAAAGAGGAAACCAAACAGAACAGGAAAACTGTGGCTGCACGCCACAGGAGGTGCATATCACACTTCTAA 1302 0.4639 MHDICLNMPPMVQNFDPEDLFSRRCIWVNGPVIVGAGPSGLAVAAGLKDQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPEYPTKFQFISYLELYAKHFNIAPQFNETVQSAKYDETFGLWRVKTIRRKGPSSGAECEVEYICRWLVVATGENSEKVVPEFEGLGEFGGHVTHACEYKSGEGFGGQKVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREIFGKSTFEVAVMLMKRLPLWMVDKILLILARLTLGNVEKYGLKRPSVGPLEFKHTAGKTPVLDIGALEKIRSGKIKVVPGIRRFLPGKVELVDGQVLQIDSVVLATGYHSNVPLWLKENEFFSNDGIPRNPFPNGWKGKGGLYAVGFTRRGLSGASLDAINVAHDIAKSWKEETKQNRKTVAARHRRCISHF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00455 433 Gene3D - 30 419 IPR036188 -
Phco6g00455 433 FunFam Flavin-containing monooxygenase 31 416 - -
Phco6g00455 433 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 32 426 - -
Phco6g00455 433 SUPERFAMILY FAD/NAD(P)-binding domain 32 235 IPR036188 -
Phco6g00455 433 Pfam Flavin-binding monooxygenase-like 33 355 IPR020946 GO:0004499|GO:0050660|GO:0050661
Phco6g00455 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 203 221 - -
Phco6g00455 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 31 50 - -
Phco6g00455 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 159 177 - -
Phco6g00455 433 PRINTS Pyridine nucleotide disulphide reductase class-II signature 30 52 - -
Phco6g00455 433 PRINTS Pyridine nucleotide disulphide reductase class-II signature 199 223 - -
Phco6g00455 433 SUPERFAMILY FAD/NAD(P)-binding domain 202 412 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00455 Phco-Chr6 4277212 4279452 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00455 6 4277212 4279452 Phco6g00455 6 4277212 4279452 ECH
Phco2g01928 2 49934737 49936456 Phco6g00455 6 4277212 4279452 PCT