Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00291 ATGGCTTCTTTAGTGTCTTCTCCATTTACCTTACCCAGTTCTAAGGTTGACCAACTTTCTTCTCTAGCCCAAAGACACGTTTTTCTTCATTCTTTCCTTCCCAAGAAGACCAATTGCTATGGCAGCAACTCAAAGGCTTCCCTGGGAGTGAAATGTGCTGCGATTGGCAATGGTCTTTTCACTCAAACCACCCCAGAAGTGCGTAGGATAGTTCCTGAGAAGAACCAAAGCCTGCCAACAGTTAAAATTGTGTATGTTGTGCTTGAAGCACAGTACCAATCATCTCTCTCTGCTGCCGTTAGAACTCTCAACAGCAACAACAAAGGTGCTGCTTTTGAGGTTGTGGGGTACTTGGTGGAGGAGCTTCGAGACGCATCCACTTATGAGACCTTCTGCAAGGACTTGGAAGATGCCAACATTTTCATTGGGTCACTTATTTTTGTGGAGGAGCTTGCCCTCAAGGTTAAGGCTGCTGTAGAGAAGGAAAGGGACAGGCTTGATGCAGTTTTGGTGTTCCCATCAATGCCTGAGGTGATGAGGCTGAACAAATTAGGGTCTTTCAGCATGTCTCAGCTTGGACAATCCAAGAGCCCCTTTTTCCAGCTCTTCAAGAAGAAGAAGCAGTCTTCTGCTGGGTTTGCTGACAGCATGTTGAAGCTGGTTAGGACTTTGCCAAAGGTGTTGAAGTACTTGCCAAGTGATAAGGCTCAGGATGCCAGGCTTTACATTCTGAGTCTGCAGTTTTGGCTTGGTGGATCACCTGATAATTTACAAAACTTCCTCAAGATGATTTCGGGGTCTTATGTTCCGGCGTTGAAAGGGACAAAGATGGAGTACTCGGAGCCGGTTTTGTACTTGGACAGTGGAATTTGGCACCCTCTGGCTCCTTGTATGTATGATGATGTAAAGGAGTATTTGAATTGGTATGGAACCAGAAGGGATGCAAATGAGATGATTAAGAGTCCAAATGCGCCTGTAATTGGTTTGATTTTGCAGAGGAGCCACATTGTGACTGGGGATGATGGTCACTATGTGGCTGTGATCATGGAGCTTGAGGCTAAAGGTGCTAAGGTTATTCCAATTTTCGCGGGCGGGCTTGACTTTTCGGGGCCAGTGGAGAGGTTCTTGATTGATCCAATCACTAAGAAACCGTTTGTGAATTCTATTGTGTCACTCACTGGCTTTGCGCTTGTTGGAGGGCCTGCAAGGCAGGACCATCCAAGGGCAGTTGAGGCTTTGATGAAGCTAGATGTTCCTTACATTGTTGCATTACCATTGGTGTTCCAGACAACAGAAGAGTGGCTGAACAGTACTTTGGGTTTGCATCCTATTCAGGTTGCTCTTCAAGTTGCACTGCCAGAGCTAGATGGGGGCATGGAGCCTATAGTTTTTGCTGGTCGAGATCCTAAAACAGGAAAATCTCATGCTCTTCACAAGAGAGTGGAGCAGCTCTGCACCAGGGCAATAAAATGGGCTGAATTGAAAAGGAAAACAAAGGAAGAGAAGAAACTGGCAATCACTGTCTTCAGTTTCCCACCAGACAAAGGCAATGTAGGAACTGCAGCCTACCTTAACGTCTTCTCCTCCATTTTCTCTGTTCTTAAAGATCTTCAAAGAGATGGATACAATGTTGAGGGACTTCCAGAAACTTCAGAAGCTTTGATTGAAGAAGTAATACATGACAAAGAAGCACAATTTAGCAGCCCAAATCTGAACGTTGCATACAAAATGAATGTCCGAGAATACCAAAGTCTAACTCCCTATGCCACAGCATTAGAAGAAAACTGGGGAAAACCTCCTGGGAATCTGAATTCAGATGGAGAGAATCTATTGGTATATGGGAAACAATATGGTAATGTATTCATAGGGGTTCAACCCACATTTGGATATGAAGGTGATCCTATGCGGTTGCTTTTCTCCAAATCTGCAAGTCCTCATCATGGATTTGCAGCATATTACTCCTTTGTGGAGAAGATTTTCAAAGCTGATGCTGTTCTTCACTTTGGGACACATGGTTCCCTTGAATTCATGCCTGGAAAGCAGGTGGGAATGAGTGATGCATGTTATCCAGACAGTCTGATTGGGAACATTCCCAATGTCTATTACTATGCTGCAAACAACCCTTCTGAGGCTACCATCGCAAAACGTAGGAGCTATGCAAATACCATTAGTTATCTGACTCCTCCAGCAGAAAATGCAGGACTCTACAAAGGTCTTAAGCAATTAAGTGAGCTCATCTCCTCATACCAGTCCCTCAAGGACACTGGTCGTGGACCACAAATTGTTAGCTCAATTATAAGCACAGCTAAACAGTGTAATCTTGACAAGGATGTGGAACTTCCAGATGAGGGTGAAGAGATCCCTGCCAAAGACCGCGACCTTGTGGTTGGAAAGGTGTATGCCAAGATCATGGAGATCGAGTCACGCCTGTTGCCTTGTGGACTGCATGTCATCGGTGAGCCACCCTCAGCCTTGGAAGCAGTTGCAACACTAGTGAACATAGCAGCACTTGATCGTCCCGAAGATTGTATTTCCTCTTTCCCATCTATACTAGCTGAGACTGTTGGAAGAAACATAGAGGAAGTTTATAGAGGGAGTGACAAAGGAATACTAAAGGATGTAGAGCTTCTTCGGCAGATAACTGAAGCTTCACGTGGAGCAATCACTTCTTTTGTGGAGCGAACTACTAATAAGAAGGGTCAAGTGGTTGATGTAGCTGATAAACTCACCTCAATTCTTGGATTTGGCATAAATGAACCATGGGTTGATTACTTGTCAAACACCAAATTTTACCGAGCTGATAGGGAAAAACTCAGAACTTTGTTCATGTTCTTGGGAGAATGTTTGAAGCTGGTTGTAGCTGACAATGAATTGGGAAGTTTGAAACAAGCCTTGGAGGGTAAGTATGTGGAGCCAGGACCTGGTGGTGATCCAATTAGAAATCCTAAAGTTTTACCAACAGGGAAGAATATTCATGCACTGGACCCACAATCTATTCCTACTACAGCAGCAATGCAAAGTGCCAAAATAGTGGTGGATAGATTGATTGAGAGGCAAAAAGCTGAAAATGGGGGAAAGTATCCTGAGACCATTGCACTTGTATTGTGGGGAACAGATAATATTAAGACATATGGGGAGTCCCTGGCTCAGGTCTTGTGGATGATCGGTGTGACACCTGTAGCTGATACATTTGGAAGGGTCAATCGGGTGGAATCTGTAAGTCTCGAAGAGCTTGGAAGGCCAAGGATTGATGTTGTTGTTAATTGCTCAGGAGTATTCAGGGACCTTTTCATCAATCAGATGAATCTTCTGGATAGAGCGGTGAAGATGGTTGCTGAATTGGATGAACCAGCAGAGCAAAACTTTGTCAAGAAGCATGCACTAGAACAAGCTCAAGCCCTTGGGATCGACATTAGAGAAGCAGCAACAAGGGTGTTCTCCAATGCATCGGGGTCCTACTCCTCAAACATAAACCTGGCAGTGGAGAATTCTTCATGGAACGATGAGAAGCAGCTCCAGGACATGTACCTTAGCCGAAAGTCTTTCGCTTTTGATTGTGATGCGCCTGGTGCAGGCATGACTGAAAAGAGAAAAGTCTTTGAGATGGCTCTGAGCACAGCAGATGCCACATTCCAAAACCTTGACTCTTCAGAAATCTCCCTCACTGATGTCAGTCATTACTTTGACTCAGATCCAACAAACCTGGTTCAAAATCTAAGGAAAGATGGGAAGAAGCCAAGTGCATACATTGCTGACACAACCACTGCTAATGCTCAGGTGCGTACCCTCTCCGAGACTGTTCGACTTGATGCAAGAACCAAGCTATTGAACCCCAAGTGGTATGAAGGCATGTTGTCTAGTGGATATGAGGGTGTTCGTGAAATTGAGAAGAGGCTCACTAACACGGTTGGATGGAGTGCAACTTCTGGCCAAGTTGACAACTGGGTGTATGAAGAAGCCAACACAACTTTCATTCAAGATGAGGAAATGTTGAAGAAGCTAATGAGCACAAATCCAAACTCCTTTAGGAAGCTGGTGCAGACATTCTTGGAAGCCAATGGACGAGGTTACTGGGAGACTACAGAAGAAAACATTGAGAAGCTCAGGCAGTTGTACTCAGAAGTTGAAGACAAAATTGAAGGCATTGATCGCTGA 4155 0.4467 MASLVSSPFTLPSSKVDQLSSLAQRHVFLHSFLPKKTNCYGSNSKASLGVKCAAIGNGLFTQTTPEVRRIVPEKNQSLPTVKIVYVVLEAQYQSSLSAAVRTLNSNNKGAAFEVVGYLVEELRDASTYETFCKDLEDANIFIGSLIFVEELALKVKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQSSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALKGTKMEYSEPVLYLDSGIWHPLAPCMYDDVKEYLNWYGTRRDANEMIKSPNAPVIGLILQRSHIVTGDDGHYVAVIMELEAKGAKVIPIFAGGLDFSGPVERFLIDPITKKPFVNSIVSLTGFALVGGPARQDHPRAVEALMKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPKTGKSHALHKRVEQLCTRAIKWAELKRKTKEEKKLAITVFSFPPDKGNVGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEVIHDKEAQFSSPNLNVAYKMNVREYQSLTPYATALEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDACYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELPDEGEEIPAKDRDLVVGKVYAKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDCISSFPSILAETVGRNIEEVYRGSDKGILKDVELLRQITEASRGAITSFVERTTNKKGQVVDVADKLTSILGFGINEPWVDYLSNTKFYRADREKLRTLFMFLGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQSIPTTAAMQSAKIVVDRLIERQKAENGGKYPETIALVLWGTDNIKTYGESLAQVLWMIGVTPVADTFGRVNRVESVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPAEQNFVKKHALEQAQALGIDIREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMTEKRKVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSSGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEEMLKKLMSTNPNSFRKLVQTFLEANGRGYWETTEENIEKLRQLYSEVEDKIEGIDR 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00291 1384 CDD CobN_like 157 1255 IPR003672 GO:0009058
Phco6g00291 1384 Pfam CobN/Magnesium Chelatase 247 1364 IPR003672 GO:0009058
Phco6g00291 1384 NCBIfam magnesium chelatase subunit H 82 1382 IPR011771 GO:0015995|GO:0016851
Phco6g00291 1384 Coils Coil 1358 1384 - -
Phco6g00291 1384 Pfam Domain of unknown function (DUF3479) 82 243 IPR022571 GO:0016851
Phco6g00291 1384 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 26 1383 IPR003672 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00291 Phco-Chr6 2841085 2846583 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00291 6 2841085 2846583 Phco6g00291 6 2841085 2846583 ECH
Phco2g01535 2 45366357 45372770 Phco6g00291 6 2841085 2846583 PCT