Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00268 ATGACTGCAGCTGTTGTTGTTCCACTGGGCCTCCTCTTCTTCTCCTCTGGCCTCATCGTTAACCTCATTCAGGCACTATGCTACGTGTTTGTGCGGCCGGTGTCGAAGAATTTGTACCGGCGGATGAACCGGGTGGTGGCGGAACTGCTGTGGTTGGAACTCGTGTGGATTATTGATTGGTGGGCTGGTGTTAAGGTCCAAGTATTCACAGATGGTGAAACTTTTCGTTCAATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGCACTCTAGCTGTGATGAAGAAATCCTCCAAGTTTCTACCGGTTATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCTTGGAGAGAAGTTGGGCCAAGGATGAAAGCACACTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTATTTGTAGAAGGAACTCGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAGTATGCAGCCTCAGCTGGATTGCCTGTTCCTAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCAGCAGTAAATCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACAGTCGCAATTCCCAAGAGTTCACCTGCTCCTACAATGCTAAGACTCTTCAGAGGGAAATCTTCAGTGGTGCATGTGCATATTAAGCGACATTTGATGAAGGATTTACCAGAAGAAAATGAAGCTGTTGCTCAATGGTGTCGAGATATATTCGTGGCTAAGGATGCATTGTTCGACAAACATATAGCTGAGGACACATTTAGTGATCAAGAGCTGCAGGATACTGGTCGACCCATAAAGTCTCTTGTGGTTGTCTTGTCTTGGGCTTGTGTGGTTGTAACCGGGGCCCTCAAGTTCCTCCAATGGTCTTCACTACTATCTTCCTGGAAGGGTGTTGCATTTTCAGCAATTGGTTTGGGAGTTGTGACTCTACTCATGCACATCTTGATCCAGTTCTCACAAGCTGAGCGTTCAACCCCTTCCAAGGTTGCCCCAGCAAAGTCCAGGAATAGGGAAGAGCTAGAGGCTAGGGATAACAAAAAAGACTAG 1152 0.4592 MTAAVVVPLGLLFFSSGLIVNLIQALCYVFVRPVSKNLYRRMNRVVAELLWLELVWIIDWWAGVKVQVFTDGETFRSMGKEHALVISNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPVPRNVLIPRTKGFVSAVNHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGKSSVVHVHIKRHLMKDLPEENEAVAQWCRDIFVAKDALFDKHIAEDTFSDQELQDTGRPIKSLVVVLSWACVVVTGALKFLQWSSLLSSWKGVAFSAIGLGVVTLLMHILIQFSQAERSTPSKVAPAKSRNREELEARDNKKD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00268 383 Pfam Acyltransferase 73 225 IPR002123 GO:0016746
Phco6g00268 383 MobiDBLite consensus disorder prediction 367 383 - -
Phco6g00268 383 MobiDBLite consensus disorder prediction 358 383 - -
Phco6g00268 383 SMART plsc_2 83 205 IPR002123 GO:0016746
Phco6g00268 383 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 5 352 - -
Phco6g00268 383 CDD LPLAT_LCLAT1-like 55 250 - -
Phco6g00268 383 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 51 279 - -
Phco6g00268 383 Pfam Acyltransferase C-terminus 236 309 IPR032098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00268 Phco-Chr6 2599732 2608668 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00268 6 2599732 2608668 Phco6g00268 6 2599732 2608668 ECH
Phco2g01568 2 45921795 45931238 Phco6g00268 6 2599732 2608668 PCT