Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00223 ATGTCGACTCCATCTTCATCCCATCTCAAAACCTCCCACCCAGTTCAAGTTTTCTCTGCCATAAAACCATCATCACACACTCCATCACCATCTTCTTCAGCCTTGAGCTCCATGAAGCTCAAGAGTCTCATCCACACACTCATAGTCTCCCACATGTGCCGTATCATTCGTGCACTCTCTAAGCTCAAAGCTGCAATCCTCCAAACGCTCAAGGGAAACCAGTCCAACAACATTCACTTCCTCCACCACAGAAAGCAAAAGATGACCAAGAAGATCATCTCCGGCTCCTTCAGGCTTCACTACAACTGGTGCTCCTCCAAATCCTCTCGAGTTATCACAGTCCCCTCAAGGGTCTTTCAGGGTTTGTCCAATCCTGCTGATGCCGACCACTTGTACGAGGATTGCCACGGCAGCCCGCAGCTCTCAGGCTACTTGAGGTGGCTGGAAGAGAAGATTTGTGAAGATGATAGCAATTACAAAAACAGCTGTGAGACCAATGAAATTGATATGCTGGCGGAATTGTTCATTGCGGATTGTCATGAGAAGTTTCGGTTGGAGAAGCAAGAGTCTGATAGAATGTTCCATGAAATGTTGGCTAGAGGCATGTGA 609 0.4745 MSTPSSSHLKTSHPVQVFSAIKPSSHTPSPSSSALSSMKLKSLIHTLIVSHMCRIIRALSKLKAAILQTLKGNQSNNIHFLHHRKQKMTKKIISGSFRLHYNWCSSKSSRVITVPSRVFQGLSNPADADHLYEDCHGSPQLSGYLRWLEEKICEDDSNYKNSCETNEIDMLAELFIADCHEKFRLEKQESDRMFHEMLARGM 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00223 202 Coils Coil 202 202 - -
Phco6g00223 202 PANTHER EMB|CAB67623.1-RELATED 18 202 - -
Phco6g00223 202 Pfam Cotton fibre expressed protein 166 200 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00223 Phco-Chr6 2205770 2206378 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00223 6 2205770 2206378 Phco6g00223 6 2205770 2206378 ECH
Phco2g01624 2 46515294 46515881 Phco6g00223 6 2205770 2206378 PCT