Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00216 ATGGGAGGTGGTGGCCGAAGCTCCGCTCCTAAACAGAGAAACTCAGGGGAAGATGAGGTTTCGAAGAAGCGCGTCCCACACGCAAAACCACCGTTCAGTCTCAGCCAACTGAAGAAAGTGATTCCGCCGCACTGTTTCCAGCGTTCGGTGATTCGTTCCTTCTCCTACGTCTTCTACGACCTGGCCATAGCCTCATGTCTGTTGTACGTGGCGTTGAACTACTTCTCTACCCTTCCCCACAACCTCTCCCTCTTGGCCTGGCCCCTCTACTGGATAATCCAAGGTTCCGTCCTCACTGGCGTTTGGGTCATAGCGCACGAGTGTGGCCACCACGCTTTCAGCGATTACCAGTGGCTCGATGACTCGGTTGGTCTCGTTCTCCATTCGTTTCTTCTGGTGCCCTATTTTTCGTGGAAATATAGCCACCGCCGCCACCACTCCAACACGGGATCCCTTGAACGTGACGAAGTGTTTGTGCCGAAAACAAAGGCCAGCATTCGTTGGTATTCTAAGTACCTCAACAACCCTGTTGGGAGAGTTCTCACTCTTTTTATCACCCTAACCCTAGGTTGGCCTCTCTACTTGGCCTTCAACGTTTCTGGTAGGAACTACGAACGTTTTGCGTGCCACTATGACCCTTATGGTCCCATTTACTCAGACCGTGAAAGGCTTCAGATTTATGTCTCCGATGTTGGGGTTCTAGCCGTGTGTTATGGCCTCTACAAGTTTGTCTTGGCCAAAGGGTTCCTTTGGGTGGTTTGTGTTTATGGGGTGCCTTTGATGGTGGTAAATGGGTTGTTGGTGTTGATCACTTTCTTGCAGCACACTCACCCTGCGGTTCCACACTACGACTCCTCCGAGTGGGATTGGTTCAGAGGGGCATTGGCCACTGTGGACAGAGATTACGGGATTCTGAACAAGGTTCTACATAACATCACTGACACACACATCGCACATCACTTGTTCTCCACGATGCCGCATTACCATGCAATGGAAGCCACGAAGGCTATAAAACCAATTTTGGGAGACTATTATCACTTTGATGGGACTCCTGTGTGGAAGGCAATGTGGAGAGAAGCAAGAGAGTGCATGTACGTTGATGAAGATTCTAAGGGCAATGGTGTTTACTGGTACAACAATAAGCTGGAATGA 1152 0.5009 MGGGGRSSAPKQRNSGEDEVSKKRVPHAKPPFSLSQLKKVIPPHCFQRSVIRSFSYVFYDLAIASCLLYVALNYFSTLPHNLSLLAWPLYWIIQGSVLTGVWVIAHECGHHAFSDYQWLDDSVGLVLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKTKASIRWYSKYLNNPVGRVLTLFITLTLGWPLYLAFNVSGRNYERFACHYDPYGPIYSDRERLQIYVSDVGVLAVCYGLYKFVLAKGFLWVVCVYGVPLMVVNGLLVLITFLQHTHPAVPHYDSSEWDWFRGALATVDRDYGILNKVLHNITDTHIAHHLFSTMPHYHAMEATKAIKPILGDYYHFDGTPVWKAMWREARECMYVDEDSKGNGVYWYNNKLE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00216 383 CDD Delta12-FADS-like 48 330 - -
Phco6g00216 383 MobiDBLite consensus disorder prediction 1 29 - -
Phco6g00216 383 Pfam Fatty acid desaturase 86 346 IPR005804 GO:0006629
Phco6g00216 383 MobiDBLite consensus disorder prediction 12 26 - -
Phco6g00216 383 Pfam Domain of unknown function (DUF3474) 16 65 IPR021863 GO:0016717
Phco6g00216 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 9 381 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00216 Phco-Chr6 2141293 2142444 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00216 6 2141293 2142444 Phco6g00216 6 2141293 2142444 ECH
Phco2g01632 2 46627054 46632887 Phco6g00216 6 2141293 2142444 PCT