Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00209 ATGGATTCTTCTTCTGATCACTCTCCTTCGTCATCTCTTCATTCTACTGGAGATGTTCAAAACGTTAAGTTCTGTCAGTGGTGTGGTGGTCCAACGAAGCATGGAATACCTGAAGGAGAAGAAAGATTCAGAGCCATATGTACCAGCTGTGGGAAGATTTCCTATCAGAACCCGAAAATGGTAGTCGGTTGCCTCATTGAACACGATAACAAGGTCCTCCTTTGCAAGCGGAAGATTGAACCATCTTATGGCCTATGGACACTTCCTGCTGGTTATCTGGAAATTGGAGAGTCAGCTATGGAAGGTGCCATCAGGGAAACAAGGGAGGAAGCCAATGCGGATGTGGAAGTGATTTCTCCCTTTGCTCAATTAGATATTCCTTTAATTGGCCAGACTTATATAATCTTCTTAGCAAGGTTGAAAAACCCCCATTTTTCACCTGGTCCAGAATCATCAGAATGCCAGCTTTTCCCTCTCAATGAAATACCTTTCAGTTCTCTATCCTTTTCATCAATGGTGGTCACTTTAAGTTTGTATGTTGAAGATATGAAGGCAGGAAGAAATCCTAAATTCCATTATGGTACTATTAACAAAAGGCCTGGTACTAGTGCTTCTGACATTCATGCCTATACACTGGATCAACATATGCAGTCATGA 657 0.4201 MDSSSDHSPSSSLHSTGDVQNVKFCQWCGGPTKHGIPEGEERFRAICTSCGKISYQNPKMVVGCLIEHDNKVLLCKRKIEPSYGLWTLPAGYLEIGESAMEGAIRETREEANADVEVISPFAQLDIPLIGQTYIIFLARLKNPHFSPGPESSECQLFPLNEIPFSSLSFSSMVVTLSLYVEDMKAGRNPKFHYGTINKRPGTSASDIHAYTLDQHMQS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00209 218 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 57 209 - -
Phco6g00209 218 Pfam NUDIX domain 61 162 IPR000086 -
Phco6g00209 218 SUPERFAMILY Nudix 23 183 IPR015797 -
Phco6g00209 218 ProSitePatterns Nudix box signature. 91 112 IPR020084 GO:0016787
Phco6g00209 218 Pfam Nudix N-terminal 23 56 IPR029401 -
Phco6g00209 218 Gene3D - 20 56 - -
Phco6g00209 218 PANTHER NUDIX HYDROLASE 23 24 212 - -
Phco6g00209 218 ProSiteProfiles Nudix hydrolase domain profile. 57 180 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00209 Phco-Chr6 2086337 2088984 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00209 6 2086337 2088984 Phco6g00209 6 2086337 2088984 ECH
Phco2g01638 2 46686773 46690339 Phco6g00209 6 2086337 2088984 PCT