Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00200 ATGGCCAAGTTCGGCGAGGGTGATAAACGTTGGATCGTCACGGAGCGTGCTGACGGCACCAACGTTCACAACTGGCACTGGGCTGAGACCAACTGTCTCGAATGGTCCAGAACCTTCTTCCGAAAGCTCTTCGCCAACGTCGCCGTCGCTGACGGTGACTTCTCCATCACCGTCAAGAAGGTGGAGAAATTCGATGGCGAGGCCTACGTTAATGTGCGCAAGGGGAAGGTGATTCCCGGGTACGAGATCGGCGTGACGCTCACGTGGGAGGGCGAGGAGCGTGGCTCCGACGGTGAGGTCCTGCAGAAGGTCAACGGCTCCGTCGAGATCCCGTACATCTCCGACGAGAACGCCGACGAGGATCCCGAGGTTAGGATTACGGTGAAGGATAGCGGGGAGGTTGGGAAGAGGCTGAAACAGGTGGTGGTGGAGAAGGCGAAACCGGTAATTTTGGAGAAAGTTAGGGTTTGGGTGGAGAGCATGGCGCAGGGTGGGCCCGTGAAGGATGATCTTGAAGCGAAGAAAGTGGTGCATCAGAAGAACAACGGTAGTAATAGTAATGATAATGTTAATATTAATGGTAATAATGAGAATGATTCGAAGAAGAATCAGAAGAGTGAAGGGAAGAAGGGGTTTAAAACGATTAGTTTGACGGAGAGGTTTAATTGTAGAGCGCAGGATTTGTTTGAGATTTTGTTGGATGAGAATAGGTGGAGGGGTTTCACGCAGAGCAGTGCGAAGATTAGCAAGGAGGTTGGGGGTGAGTTTAGTATTTTCGATGGGTCTGTTACTGGGAGAAATTTGGAGTTGCAGGAAGGGAAGTTGATCGTACAGAGGTGGAGGTTTGGGAGCTGGCTTGATGGGATTCAATCCACGGTCAGGATTGTGTTTGAGGAGCCTGAAGGTGGAATAACAGTTGTTAAGCTCACGCATAGTGATGTGCCTGAAGAAGACAGATATGGGAATGCAACTGTGGTGGAAAACACAGAGAGGGGATGGCGGGATCTCATTTTCCAAAGGATACGGGCTGTGTTTGGTTTTGGAATTTGA 1050 0.5067 MAKFGEGDKRWIVTERADGTNVHNWHWAETNCLEWSRTFFRKLFANVAVADGDFSITVKKVEKFDGEAYVNVRKGKVIPGYEIGVTLTWEGEERGSDGEVLQKVNGSVEIPYISDENADEDPEVRITVKDSGEVGKRLKQVVVEKAKPVILEKVRVWVESMAQGGPVKDDLEAKKVVHQKNNGSNSNDNVNINGNNENDSKKNQKSEGKKGFKTISLTERFNCRAQDLFEILLDENRWRGFTQSSAKISKEVGGEFSIFDGSVTGRNLELQEGKLIVQRWRFGSWLDGIQSTVRIVFEEPEGGITVVKLTHSDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00200 349 Pfam Activator of Hsp90 ATPase homolog 1-like protein 225 345 IPR013538 -
Phco6g00200 349 Gene3D - 212 348 IPR023393 -
Phco6g00200 349 Gene3D - 18 174 IPR036338 -
Phco6g00200 349 SUPERFAMILY Bet v1-like 214 348 - -
Phco6g00200 349 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 163 IPR015310 GO:0001671|GO:0051087
Phco6g00200 349 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 163 IPR036338 -
Phco6g00200 349 CDD SRPBCC_Aha1 214 347 - -
Phco6g00200 349 Pfam Activator of Hsp90 ATPase, N-terminal 29 163 IPR015310 GO:0001671|GO:0051087
Phco6g00200 349 MobiDBLite consensus disorder prediction 179 199 - -
Phco6g00200 349 SMART Aha1_N_2 29 163 IPR015310 GO:0001671|GO:0051087
Phco6g00200 349 MobiDBLite consensus disorder prediction 179 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00200 Phco-Chr6 1977536 1979704 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00200 6 1977536 1979704 Phco6g00200 6 1977536 1979704 ECH
Phco2g01653 2 46827680 46828951 Phco6g00200 6 1977536 1979704 PCT