Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00196 ATGGACAAGACAACAACAACAACAACAACCTCCTCTCAGAGAGAACTCCACGACTTCATGAACGTGGACTCCTTCTCCCAACTCCCCTTCATCCGTCCAGCTCCTCTTGCTAAGGAGAAGTCAGCCATTCGTCTCTTCGGCATAGAGTTCGCCGGCGGAAACAACACTGCTGTTTCACCCGAGGACTCTGACTCCGGAGAAACAACAACCAACACCAACAACAACCTCAACTCATTCGAACTTGATGCTAACAAGGACGATACTACCACCACCACTGTCACTGTTACTGACAACAACGGCGAAAGCAGTCGCAGGTTCGAGTGTCACTACTGCTGCCGGAACTTTCCCACCTCCCAAGCCCTCGGCGGTCACCAAAACGCGCACAAACGCGAACGCCAACACGCCAAACGCGCGCACCTTCAGTCAACGATGGTACATGGAAGCACGTTCTCTGACGCGCACCATGTCTACAATCTCATGAACTACCGCTTCGGTTCCGCTCCAACACCGCCAATGCCGTATCCAACGTGGAACAACGCCGCCGCCGCCGCCACCAACACGAGGTTCTACGGAACGACACCGTTTTCCCACAGCCACCACCAGCACCAGCAGCCTATTAACGGAAACCCTTTGGCTTTGTGGCGAATTCCGAGCAATAACCCTAGTTTCAGCCACGAACGATCGTCGTTGTTCGCGTCGGAGGAAATAACGAACGTGAGAGCCTCGCAGGTTGTGGGAGCCTCGGGGTCCCAAAACCGCTACGTGTATGACTCCAAACGCGGAAGTGTGCACGACCATGTGAGTTTGGATCTTCATCTGTAA 822 0.5401 MDKTTTTTTTSSQRELHDFMNVDSFSQLPFIRPAPLAKEKSAIRLFGIEFAGGNNTAVSPEDSDSGETTTNTNNNLNSFELDANKDDTTTTTVTVTDNNGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSDAHHVYNLMNYRFGSAPTPPMPYPTWNNAAAAATNTRFYGTTPFSHSHHQHQQPINGNPLALWRIPSNNPSFSHERSSLFASEEITNVRASQVVGASGSQNRYVYDSKRGSVHDHVSLDLHL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00196 273 SUPERFAMILY beta-beta-alpha zinc fingers 103 134 IPR036236 -
Phco6g00196 273 MobiDBLite consensus disorder prediction 56 82 - -
Phco6g00196 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Phco6g00196 273 Gene3D Classic Zinc Finger 82 158 - -
Phco6g00196 273 MobiDBLite consensus disorder prediction 52 82 - -
Phco6g00196 273 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Phco6g00196 273 PANTHER ZINC FINGER PROTEIN GIS 3 273 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00196 Phco-Chr6 1887313 1888134 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00196 6 1887313 1888134 Phco6g00196 6 1887313 1888134 ECH
Phco2g01666 2 46989292 46989990 Phco6g00196 6 1887313 1888134 PCT