Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00146 ATGTGTGGGTGCTGCAGATGCTATACAGAACTCCATCAATGGCGTGGTCCACCAACACTGTTCACCCATGCAAACCGTATATGGATGTCTGCGCGTGCAAAACCACGCGCTGCCGTGAACCCATTGCTTCACTTTCCAACACCCTGCCTTGTTTTCCAATGCAACGGCTACAGTCAAAATCCCAACTTTAAGAGCACAATGGAATCTGAAAATGGAGTTGCTATGGAGGACGAGAAACATGTTATTGGGGAAACAACTAAGGAGAATATAAACAAGGAAGCTGAAAACAGTTGCAATGCTGAAATTCAGACCAAGAATGAGGCATCTGAATCCATTGTAAAAGTTGAAGGGCCCAAATCTACAGCAAGTAGAAACTCAAAACTTGCCAAGGAACATGGTGGCAAAGGTAGTGTTGCTTCAAAGAAGAACAAATCTGCCACCAAAGACAAACCCAATTTGAACTCCACAACTTCATCACCTCGAACACACAGACCAAACCTCTCCAAGAGCCTTTCTTTCCCAGCCAAATCAGCTGGTGGAGATGTCATGAAGAAAAGCATTAATGGCACTTTTGTGAAAACAGAAACTAAGCACGTTAATGGGGCTAGGGCCAAGGCTTCCATTCATCGTTCAAGCAGGCTGACAAACAATGAAGTTAACTCAAAGCAATCTGAAAAAAACACTGGAAATTCTAACCACAGGACCTCTTTAACATCCATGACTAGCCTTAAAAGCTCTGAGATTGGTGAGTCTTCTCCGGCGGTGAATGCGGTTTCCAAGAGCCTTATATCTGAGGCATCCTTACCTGTTGATCAGATCACAACCCCAGCAAAAACTGAAAAACCAAATAAAGAGGATGATGATGCTCACTCCACAACTTCAAGTCATACTCCTCGTAGGAGGAGCAGTGGTTCTGGATTTTCCTTCAGATTGGAAGAAAGAGCAGAAAAGAGGAAGGAGTTCTTCTCAAAGTTAGAAGAGAAAATTCAGGAAAAGGAAGCAGAGAAAACTAATCAGCAAGAGAAATCAAAGGAAAACCAGGAGGCTGAGATCAAGCAATTGAGGAAGACTATGACATTCAAAGCCACTCCAATGCCAAGTTTCTACAAGGAACCTCCTCCAAAAGTTGAATTGAAGAAGATACCTATAACACGCCCAAAATCTCCAAAGCTTGGAAGGAACAAAGGATATGTTGTGAACCATTCAGATGATAATTACTGTTCTAGTCCACATGCAAAGCAGCAACAGAATGATTCAACCAAGGCAAAGGTAAAGGGTACTATTAAAGAAGTGATTTCAAAGAAACCAATCAGAAAAACTCAAGCCAAGCTGCAGTCTCAGGAAACTGCAATTGGAAAAACTGAGAAGAATTCTGTGAAGTCTACTAAAATCGACCAAGATGTCAAAGCAGGCACAGGAAACAATGAAGAAAGCCATGATCCACCAGTTAGCAATTCTGAATATCAAGATGACATGGAGCTAGAATCCAAAAATGAGCTTGCTCAGAATGTTGCACTGGTCTTAAATTCATCCACCCCCGAGATTGTATCATATGAGGTTACTGTTGGAGTGTAG 1575 0.4222 MCGCCRCYTELHQWRGPPTLFTHANRIWMSARAKPRAAVNPLLHFPTPCLVFQCNGYSQNPNFKSTMESENGVAMEDEKHVIGETTKENINKEAENSCNAEIQTKNEASESIVKVEGPKSTASRNSKLAKEHGGKGSVASKKNKSATKDKPNLNSTTSSPRTHRPNLSKSLSFPAKSAGGDVMKKSINGTFVKTETKHVNGARAKASIHRSSRLTNNEVNSKQSEKNTGNSNHRTSLTSMTSLKSSEIGESSPAVNAVSKSLISEASLPVDQITTPAKTEKPNKEDDDAHSTTSSHTPRRRSSGSGFSFRLEERAEKRKEFFSKLEEKIQEKEAEKTNQQEKSKENQEAEIKQLRKTMTFKATPMPSFYKEPPPKVELKKIPITRPKSPKLGRNKGYVVNHSDDNYCSSPHAKQQQNDSTKAKVKGTIKEVISKKPIRKTQAKLQSQETAIGKTEKNSVKSTKIDQDVKAGTGNNEESHDPPVSNSEYQDDMELESKNELAQNVALVLNSSTPEIVSYEVTVGV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00146 524 MobiDBLite consensus disorder prediction 423 437 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 125 148 - -
Phco6g00146 524 Coils Coil 315 357 - -
Phco6g00146 524 PANTHER PROTEIN WVD2-LIKE 4 139 518 IPR044833 GO:0008017
Phco6g00146 524 MobiDBLite consensus disorder prediction 92 124 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 483 497 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 439 457 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 330 355 - -
Phco6g00146 524 Pfam Targeting protein for Xklp2 (TPX2) domain 307 375 IPR027329 -
Phco6g00146 524 MobiDBLite consensus disorder prediction 278 295 - -
Phco6g00146 524 Coils Coil 437 457 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 209 248 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 464 482 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 401 422 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 330 497 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 149 173 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 87 248 - -
Phco6g00146 524 MobiDBLite consensus disorder prediction 268 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00146 Phco-Chr6 1372025 1380452 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02274 2 53367605 53370093 Phco6g00146 6 1372025 1380452 PCT